Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq673 98.7 6e-16
seq610 95.1 8e-15
seq111 93.3 3e-14
seq122 87.8 1e-12
>seq673
Length=25255
Score = 98.7 bits (108), Expect = 6e-16
Identities = 143/198 (72%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| |||||||||||| | || | || |||||||| || ||||| ||
Sbjct 24449 TCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 24508
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| | || | ||||||||||| |||||| || || ||
Sbjct 24509 ATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 24566
Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| | ||| | ||| || |||| || ||||| || || ||||| || ||
Sbjct 24567 --TCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTT 24624
Query 34967 CACAAAGATCTGCATATT 34984
||| || |||||||| ||
Sbjct 24625 CACGAAAATCTGCATTTT 24642
>seq610
Length=159711
Score = 95.1 bits (104), Expect = 8e-15
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || || | || |||| |||||||| ||||| || ||
Sbjct 159308 TTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAA 159249
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || ||||| ||| | || | || ||||| || |||||| || |||
Sbjct 159248 GATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTT 159189
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| || | ||| || || | || ||||| ||||| || || ||||||||
Sbjct 159188 CTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCAC 159129
Query 34970 AAAGATCTGCATATTCGTAG 34989
|| ||||||||||| ||||
Sbjct 159128 GAAAATCTGCATATTGGTAG 159109
>seq111
Length=461598
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| |||||||| || ||||| || || | ||| | || |||||||| || || || ||
Sbjct 359687 TTCCTTCTGAATATTGTAGTCGGACAGAGTACGTCCGTCTTCCAGCTGCTTGCCAGCGAA 359746
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || ||||| || |||| | ||||||||||| ||||| || || |
Sbjct 359747 GATAAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC--A 359804
Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| || |||| || || ||| || || | ||| ||||| || |||||||| || ||
Sbjct 359805 TTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTTTTG 359864
Query 34968 ACAAAGATCTGCAT 34981
|| |||||||||||
Sbjct 359865 ACGAAGATCTGCAT 359878
>seq122
Length=254344
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/214 (70%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||||||||| || ||| | ||| | || |||
Sbjct 68470 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGTCCGTCTTCC 68529
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || ||||| || || | || ||||| ||| | || | |||||||||||
Sbjct 68530 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 68589
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| ||||| | | ||||| | ||| | ||| || || | || || ||
Sbjct 68590 ATCTTGGCCTTGAC----GTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGT 68645
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || | |||||||| ||||||||||||
Sbjct 68646 CTTGCCAGTCAACGTCTTCACGAAGATCTGCATA 68679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324624816632160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |