Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq50 190 2e-42
seq299 109 4e-18
seq934 102 7e-16
>seq50
Length=143579
Score = 190 bits (210), Expect = 2e-42
Identities = 545/827 (66%), Gaps = 12/827 (1%)
Strand=Plus/Minus
Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA 551849
|| ||| | ||||| || || |||||||| ||||| || |||| ||| | ||| |||
Sbjct 57105 GGCGATACACATCTAGGAGGAGAAGATTTCGATAACCGAATGGTCTCACATTTTGTGGAA 57046
Query 551850 GATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCGTCGTC 551907
|| |||||||| || || || || | || || | | || ||| | |||||||
Sbjct 57045 GAGTTTAAACGTAAGAATAAGAAGGACATCTCAAC--CAACAAACGAGCATTGCGTCGTC 56988
Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967
| | || ||||| ||| | || || || || | ||| | || || | | ||||
Sbjct 56987 TGCGTACGGCTTGTGAACGTGCGAAGCGCACTTTGTCAGCATCAACCCAGGCAAGCATTG 56928
Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTG 552027
|| | ||||| | || || || ||||||| | || | || |||| ||| ||||
Sbjct 56927 AAATCGATTCGCTTTTCGAAGGGATTGATTTCTACACTTCGATGACGAGAGCCCGTTTTG 56868
Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087
|||| | ||| ||| | || | | || || |||||||| | ||| || | |
Sbjct 56867 AAGAACTCAATTCAGATTTGTTCCGTGACACGATGGAACCAGTGGCTAAAGCCCTACGGG 56808
Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147
| | ||||| |||||| || |||| || || || | |||||||| || || | |
Sbjct 56807 ACGCCAAGATGGATAAAGGTAATATACACGACATAGTTTTGGTTGGTGGTTCAACTCGGA 56748
Query 552148 TTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAG 552205
|||| || | | |||| | | || || || |||||| || |||| ||| ||
Sbjct 56747 TTCCGAAGGTACA-GAAACTTCTGCAGGATTTCTT-CAATGGGAAGGAATTGAATAAATC 56690
Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCT-G 552264
| || || ||||| ||||| || || ||||| ||| | ||||| || || ||| | |
Sbjct 56689 CATCAACCCCGATGAAGCTGTCGCATACGGTGCTGCAGTACAAGCGGCAAT-CTTGCAAG 56631
Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324
| | ||| || | || || | | | | ||||| || || || || | |
Sbjct 56630 GTGATACTTCGGAGGCGGTCCAGGATTTACTTTTGTTGGATGTCACGCCACTGTCATTAG 56571
Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384
| | ||||| | |||||| | ||||| ||| ||| | ||||||| || || ||
Sbjct 56570 GAATCGAAACGGCTGGAGGAGTAATGACCGTTCTGATCAAGCGAAATACCACGATACCGA 56511
Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444
|| || | | ||| |||| || || || |||||| ||| ||| ||||||
Sbjct 56510 CGAAGCAAACCCAAACATTCACTACCTACTCGGACAATCAACCTGGCGTTCTGATTCAAG 56451
Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGG-TACTTTTAATTTA 552503
| |||||||||||| | | || ||||| || |||| ||||| | ||| || | |
Sbjct 56450 TCTTTGAAGGAGAACGGGCCATGACGAAAGACAACAATCTTCTTGGAAAATTTGAACTCA 56391
Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563
| |||||||| |||||||| || ||||| || || |||||||| || |||||||| |||
Sbjct 56390 G-TGGTATTCCACCTGCTCCGCGCGGAGTGCCACAGATTGAAGTCACATTCGATATTGAT 56332
Query 552564 GCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAA 552610
||||| || || ||||||| ||||| ||| ||||| | |||||
Sbjct 56331 GCCAACGGTATCATGAATGTATCTGCTATTGAGAAATCGACTAACAA 56285
Score = 105 bits (116), Expect = 5e-17
Identities = 136/186 (73%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || ||||| || || || ||| ||||| || || | || |||| || |||||
Sbjct 57828 GGCATTGATTTGGGGACGACGTATTCGTGTGTAGGAGTGTTCCAGCATGGAAAGGTTGAT 57769
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|||||||| ||||||||||| || | || || ||||||||||| |||| || || ||
Sbjct 57768 ATTATTGCGAATGATCAAGGCAATCGGACAACACCATCTTATGTGGCTTTTACCGATACC 57709
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175
|| | | ||||||||||||| ||| |||||| || || ||||| | ||||| |
Sbjct 57708 GAGCGGCTTATTGGTGATGCAGCCAAAAATCAAGTAGCAATG--AATCCAAATAATACCA 57651
Query 550176 TTTTTG 550181
||||||
Sbjct 57650 TTTTTG 57645
>seq299
Length=69886
Score = 109 bits (120), Expect = 4e-18
Identities = 122/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723
||||||||||||| || || || || ||||||||||| |||| || || || || || |
Sbjct 6005 TTGATTTTTCTTCGCCCAACATCGCTAAAGAAATGCACGTTGGGCACTTACGGTCCACAA 5946
Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCA 930783
| || ||||| ||| | || |||| ||||| || || | ||| ||| |||
Sbjct 5945 TAATAGGAGATTCTATTTGCCGATTTCTTGAATTTTTGCGACACGATGTTTTGCGAATCA 5886
Query 930784 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 930826
||||||| ||||||||||||||||| ||||||||| | || ||
Sbjct 5885 ATCATATCGGTGATTGGGGAACACAGTTTGGTATGCTTATCGC 5843
>seq934
Length=88778
Score = 102 bits (112), Expect = 7e-16
Identities = 179/258 (69%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
||||| ||| | || || || || || || ||||| |||| || |||| || ||||||
Sbjct 35520 GGTATTGATCTGGGTACGACCTACAGCTGCGTTGGAGTTTTCCAGCATGGCAAGGTTGAA 35579
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
||||||||||| || || || ||| | || || || || || ||| | ||||| || ||
Sbjct 35580 ATTATTGCCAACGACCAGGGCAACCGCACCACCCCGTCCTACGTTGCCTTCACCGACACC 35639
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATACT 550174
|| | | | | || ||||| || ||| | || |||| || || || ||||| ||
Sbjct 35640 GAGCGTCTGATCGGCGATGCCGCCAAAAACCAGGTGGCCA-TG--AACCCGACCAACACA 35696
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234
|| || || || || || || || ||| | | || | ||| | | | ||||| ||
Sbjct 35697 ATCTTCGACGCCAAGCGGTTGATCGGACGCAAGTTCGACGATCCTGCCATCCAGGCCGAC 35756
Query 550235 ATGAAGCATTGGCCTTTC 550252
|||||||| ||||| |||
Sbjct 35757 ATGAAGCACTGGCCATTC 35774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029178596387800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |