Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq14 140 6e-28
seq1047 96.9 6e-15
>seq14
Length=264275
Score = 140 bits (154), Expect = 6e-28
Identities = 289/427 (68%), Gaps = 5/427 (1%)
Strand=Plus/Plus
Query 47941 GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGAT 48000
||||| || ||| ||| ||||||| ||| |||||||||| | |||||||| |
Sbjct 132110 GCCCAACTCCACCAACAGACGATCCGCCACGAACTCGATGTACTGCGACATGAGCTCGCA 132169
Query 48001 GTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCAC 48060
||||| || | | || |||| || || || || ||||||| ||| ||| ||
Sbjct 132170 ATTCATACCCAACATATCGACAGGCAGTGCTTTCGTCAGGAACTCCTGCTCGATCATGAC 132229
Query 48061 GGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGG- 48119
|| || | | || | | | ||||| || ||||| | ||| | ||||
Sbjct 132230 TGCATCACGGATGATATCCGTTACGCGTTTGCGCGATGGTTTCTGTACCAGATACTTGAA 132289
Query 48120 CATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGG 48179
||| ||| ||||||||||| | || || ||||| || || ||| ||| ||||||
Sbjct 132290 CAT-GAGA---CAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTCGTTGG 132345
Query 48180 AGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGC 48239
|||| ||||| ||||| | || | || || |||||||| || || || || ||
Sbjct 132346 AGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTGC 132405
Query 48240 CAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGT 48299
|| ||||||||| ||||| || || |||||||| || | ||| ||| | ||| |
Sbjct 132406 CACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTAGTTAGCCT 132465
Query 48300 TCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359
||||| ||||||||| | ||||||||| ||||| ||| | ||| |||| |||||
Sbjct 132466 TCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCT 132525
Query 48360 CTATGGC 48366
| |||||
Sbjct 132526 CGATGGC 132532
Score = 84.2 bits (92), Expect = 4e-11
Identities = 159/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||||| || ||| || || || || ||||||||||| || ||||| | ||||||
Sbjct 132662 GTACATTTCGCTGTGTACGTTTTCCATCGCGATCTGGAAACCATAGAAACAGCGGGCCTC 132721
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
|||||| || || | ||| | || | |||||| || || || || ||||| ||
Sbjct 132722 CGTCACCTGTACCTCCTGGCTGAACCGTTCAACCAGATTTTCGTTCACAATACCATCCGA 132781
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
||||| |||||||| || || || | |||||| || || | | | || | ||
Sbjct 132782 GGCAGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACGTTCACTCGGTTTCAGTGAATC 132841
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
|||| | | | ||| || || ||||| ||||| || |||||||| || ||
Sbjct 132842 CCAGTCTTTCATGTCCTTTGAGAGATCCACCTCTTCGACCGTCCAGAAAGAAGC 132895
>seq1047
Length=31309
Score = 96.9 bits (106), Expect = 6e-15
Identities = 259/390 (66%), Gaps = 11/390 (3%)
Strand=Plus/Plus
Query 213818 CTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTC 213877
||||||||||| || || | |||||||||| ||||| |||||| | | ||| ||
Sbjct 17971 CTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTC 18030
Query 213878 CACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCAT 213937
|||| ||| || ||||| | ||| ||||| | ||| | ||||| |||||||
Sbjct 18031 TTTGCCAGTGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAG 18090
Query 213938 GTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC-CAGCCTGGCCACCA 213993
||||| |||||||| || || | |||| || || ||||| || | | || || |
Sbjct 18091 ATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTG--CAGTA 18148
Query 213994 -TGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATA 214052
| ||| ||| |||||| | ||||| | ||||| || || || ||||| || |||
Sbjct 18149 TTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATA 18208
Query 214053 TACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGG 214110
|| | || ||||| | | || ||| || ||||||||||| || | || |
Sbjct 18209 TATGTTCCTTTCGCCCTAATGCAGTGTACAT--TCAGGCCTATGCCACCAGCCGATTTAG 18266
Query 214111 AGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGT 214170
|||||| ||| || | | | ||| || || || | ||||| || || | |
Sbjct 18267 AGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTG 18326
Query 214171 TCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200
| |||| ||||||| ||| || || ||||
Sbjct 18327 TGAGCAGGAAGCAGGACGACAGTTGCGGCC 18356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931506949964800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |