Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 123 5e-23
seq14 105 1e-17
>seq1047
Length=31309
Score = 123 bits (136), Expect = 5e-23
Identities = 473/735 (64%), Gaps = 11/735 (1%)
Strand=Plus/Plus
Query 221683 GGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTT 221742
||||| |||||| ||||| ||||| ||||||||||||||| || | || || ||
Sbjct 17620 GGGTTTCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCATCTTT 17679
Query 221743 GTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATT 221802
| || | || || || || || ||||| |||||||| || || | | |
Sbjct 17680 TGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTG 17739
Query 221803 GTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAG 221862
|| ||| ||| |||||| || || ||||| ||||| | || | ||||| || |
Sbjct 17740 CTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAAC 17799
Query 221863 CTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACC 221922
||| | | | ||| | ||| | ||| || | || | ||| |||
Sbjct 17800 CTGTGATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGACC 17859
Query 221923 CTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAG 221982
|||| || | || || || ||||| | || |||| ||||| | | ||| ||
Sbjct 17860 CTCGCGCT---CGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAA 17916
Query 221983 GCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCAT 222042
|| ||||| | || ||||| |||||||| | |||| ||| || | ||||||
Sbjct 17917 TCCAGGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCAT 17976
Query 222043 GAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCC 222102
||| | || || ||||||||||| | || | || || | || ||| || |||
Sbjct 17977 GAACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCC 18036
Query 222103 GTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGAC 222162
|||| || | ||||||||||||||||| | || | ||||| |||||||||||||
Sbjct 18037 AGTGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGAT 18096
Query 222163 GGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAG-AGCGTTGA 222221
|| | || |||||||||||||| || || || | || ||| | ||| | |||
Sbjct 18097 AGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGT-CAACATAACGTGCAGTATTATTGT 18155
Query 222222 AGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCAC 222281
||| ||| || ||||||| | ||||| || ||| || || || ||| || | |
Sbjct 18156 AGACGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTC 18215
Query 222282 CGCCGGCCCTCAGGTTACTG-GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATG 222340
| ||||| | | | || || || ||| || ||||| || ||| ||||||| |
Sbjct 18216 CTTTCGCCCTAATG-CAGTGTACATTCAGGCCTATGCCACCAGCCGATTTAGAGATCAAG 18274
Query 222341 GCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGT--TCAGCA 222398
|| || || ||||| || || ||||| || || ||| ||| | | ||||
Sbjct 18275 GCACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCC--GACATTGTGAGCA 18332
Query 222399 GAAAACAAGACGACA 222413
| || || |||||||
Sbjct 18333 GGAAGCAGGACGACA 18347
>seq14
Length=264275
Score = 105 bits (116), Expect = 1e-17
Identities = 172/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845
||||| |||||||||| | || || | ||| | |||||| ||||| |||||
Sbjct 132541 CTGTTCAATGCCATCGAGACGCTGCCGTGCGTGAAGCGTAAGGCGGACTGGGCGATGAAC 132482
Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905
|||||| ||| ||| |||| | |||||||| | || || || || || || |||
Sbjct 132481 TGGATCTCGAGCAAGAAGGCTAACTACGGCGAGCGTATCGTGGCGTTCGCAGCCGTCGAG 132422
Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965
|| ||||| ||||| || ||||| |||||||||||||| ||| || || |||
Sbjct 132421 GGTATCTTCTTCAGTGGCAGCTTTGCTGCCATCTTCTGGCTAAAGAAGCGTGGCCTGATG 132362
Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTT 26025
|| || ||| || ||||||||||| ||| | || || ||| | || | || |||
Sbjct 132361 CCGGGTCTGACGTTCTCCAACGAGCTGATCTCGCGCGATGAAGGTTTACATTGCGACTTT 132302
Query 26026 GCCTGCCT 26033
||||| ||
Sbjct 132301 GCCTGTCT 132294
Score = 102 bits (112), Expect = 2e-16
Identities = 153/215 (71%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATCCA 25570
|||||| | ||||||| | ||||| | ||||||||| | | |||| | | || | |
Sbjct 132887 CTGGACGGTCGAAGAGGTGGATCTCTCAAAGGACATGAAAGACTGGGATTCACTGAAACC 132828
Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630
|| || | ||||| || | ||||| | || ||||| || ||||| |||||||| |
Sbjct 132827 GAGT-GAACGTCATTTCATCTCGCACGTGCTCGCCTTCTTCGCTGCCTCGGATGGTATTG 132769
Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690
||||||| |||||| || | |||| | ||| || ||| ||||||| ||||
Sbjct 132768 TGAACGAAAATCTGGTTGAACGGTTCAGCCAGGAGGTACAGGTGACGGAGGCCCGCTGTT 132709
Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCAC 25725
|||| ||||||||||| || || ||||| || |||
Sbjct 132708 TCTATGGTTTCCAGATCGCGATGGAAAACGTACAC 132674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928819024556800
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