Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq80 127 3e-24 >seq80 Length=276208 Score = 127 bits (140), Expect = 3e-24 Identities = 356/541 (66%), Gaps = 14/541 (3%) Strand=Plus/Plus Query 139502 AAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCTTATC 139561 || ||| || | ||||| || || ||||| ||||| || ||||| | | || | | Sbjct 109931 AAGCAGCTAATGCCTGTTTATGACAAACCTATGATCTATTATCCGCTTTCCACATTACTT 109990 Query 139562 GAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATAGA-AATTCTTTCGA 139620 ||| || || || || || || || || | || || || ||| | || |||| Sbjct 109991 TTAGCGGGAATCAAGGATATTCTGATCATCACTACCCCGCATGATCAAGAAGGCTTTATT 110050 Query 139621 GAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTTCAAGAAAA 139680 ||||| || || | ||||| ||| | || || |||||||||| ||| || || Sbjct 110051 AAACTT-CTGGGCGATGGTTCTCAAATCGGGTGTAATATAGAATACGTTGTACAGCCAAG 110109 Query 139681 ACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTA---AATCTAA 139737 ||| |||| |||||||| ||||| || | || || | || || || | | ||| Sbjct 110110 CCCTGATGGCTTAGCACAGGCTTTTATTTTGGGCGACCAGTTTATCGGCAGTGATTCT-- 110167 Query 139738 AGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCTTCTAATATAGATAGATTACTTAT 139797 | || || | || ||||| || ||||| | | |||| | || | | || || | Sbjct 110168 -GCCGCATTGGTGTTGGGTGATAATATTTTTTACGGTTCTGAAATGGGAACTTTGCTGA- 110225 Query 139798 GGAAGCTAATATGT---CTGATAAAAATACGATATTTGCATATCGTGTAAATGATCCTCA 139854 || ||| | | ||| | | | ||||| |||| || ||||||| | Sbjct 110226 --AAAATAAAACCAACCCGGATGGAGGTGTTGTTTTTGCCTATCACGTGGCTGATCCTGA 110283 Query 139855 GAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAAGAAAAACC 139914 ||||||||||| || ||||| || || || || || ||||| || |||||||| || Sbjct 110284 AAGATATGGTGTTGTAGAATTTGACAAAGATCTGAAAGCGGTTTCTATTGAAGAAAAGCC 110343 Query 139915 TTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATAACGATGTTAT 139974 || || |||||||| |||||||| ||||| || | ||||| ||| ||||| |||| | Sbjct 110344 ATTAAAGCCTAAATCAAATTACGCTGTACCCGGACTTTATTTTTATGATAACAATGTAGT 110403 Query 139975 CGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAATATCAGATATTAA 140034 |||| | || || | || |||||||| || | || ||| ||||| | ||||| || Sbjct 110404 CGAAATTGCCAAAAACATTAAACCTTCTGCAAGAGGTGAACTGGAAATTACCGATATCAA 110463 Query 140035 C 140035 | Sbjct 110464 C 110464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701842923318400