Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_020079.1
Length=147737
Score E
Sequences producing significant alignments: (Bits) Value
seq80 93.3 4e-14
>seq80
Length=276208
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/209 (70%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 39202 AGACCCATCTCCGAGAAGATACTCAAAGTCTTCCTGATCACCTGGTGTGGTGATGATTAA 39261
||| ||||| || ||||| | |||| |||| |||||| || || |||||||| |
Sbjct 110071 AGAACCATCGCCCAGAAGTTTAATAAAGCCTTCTTGATCATGCGGGGTAGTGATGATCAG 110012
Query 39262 AATATCCTTAATGTCAGCCAACATCAATACCGATAAAGGGTAGTAGATCATGGGTTTGTC 39321
||||||||| || | || || | ||| || | || || |||||||| ||||||||
Sbjct 110011 AATATCCTTGATTCCCGCTAAAAGTAATGTGGAAAGCGGATAATAGATCATAGGTTTGTC 109952
Query 39322 ATACACAGGGAGCAATTGCTTGCTCACACTGC--GTGTTACCGGATGAAGGCGGGTTCCA 39379
||| ||||| | | |||||||| ||||| |||| || | ||| | |||||
Sbjct 109951 ATAAACAGGCATTAGCTGCTTGCT--TACTGCAATCGTTAGAGGGTAAAGTCTTGTTCCG 109894
Query 39380 CTTCCTCCCGCCAAAATAATACCTTTCAT 39408
|||||| || || || || ||||||||
Sbjct 109893 GATCCTCCGGCTAATATTATTCCTTTCAT 109865
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 38798 TTGATATCAGTGATCTCCAGTTCTCCACGCGCGGAAGGGGTTACTTCTAATGCACGTTGA 38857
|||||||| || || |||||||| || | || ||||| | | | | ||| ||
Sbjct 110463 TTGATATCGGTAATTTCCAGTTCACCTCTTGCAGAAGGTTTAATGTTTTTGGCAATTTCG 110404
Query 38858 ATAACAGAGTTATCATAGAAATACAAACCTGTGACAGCATAATCTGATTTAGGATTTTCA 38917
| ||| ||||||||| ||||| | || | ||||| |||| ||||||||| |||
Sbjct 110403 ACTACATTGTTATCATAAAAATAAAGTCCGGGTACAGCGTAATTTGATTTAGGCTTTAAT 110344
Query 38918 GGTTTCTCTTCAATAGAAATAGCTTGACGATTACTCCCAAATTCAACCACACCGAATCGT 38977
|| || ||||||||||||| |||| ||| | ||||||| || ||||| ||| |
Sbjct 110343 GGCTTTTCTTCAATAGAAACCGCTTTCAGATCTTTGTCAAATTCTACAACACCATATCTT 110284
Query 38978 TCAGGATC 38985
||||||||
Sbjct 110283 TCAGGATC 110276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472617284506400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |