Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq80 93.3 4e-14 >seq80 Length=276208 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 39202 AGACCCATCTCCGAGAAGATACTCAAAGTCTTCCTGATCACCTGGTGTGGTGATGATTAA 39261 ||| ||||| || ||||| | |||| |||| |||||| || || |||||||| | Sbjct 110071 AGAACCATCGCCCAGAAGTTTAATAAAGCCTTCTTGATCATGCGGGGTAGTGATGATCAG 110012 Query 39262 AATATCCTTAATGTCAGCCAACATCAATACCGATAAAGGGTAGTAGATCATGGGTTTGTC 39321 ||||||||| || | || || | ||| || | || || |||||||| |||||||| Sbjct 110011 AATATCCTTGATTCCCGCTAAAAGTAATGTGGAAAGCGGATAATAGATCATAGGTTTGTC 109952 Query 39322 ATACACAGGGAGCAATTGCTTGCTCACACTGC--GTGTTACCGGATGAAGGCGGGTTCCA 39379 ||| ||||| | | |||||||| ||||| |||| || | ||| | ||||| Sbjct 109951 ATAAACAGGCATTAGCTGCTTGCT--TACTGCAATCGTTAGAGGGTAAAGTCTTGTTCCG 109894 Query 39380 CTTCCTCCCGCCAAAATAATACCTTTCAT 39408 |||||| || || || || |||||||| Sbjct 109893 GATCCTCCGGCTAATATTATTCCTTTCAT 109865 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 38798 TTGATATCAGTGATCTCCAGTTCTCCACGCGCGGAAGGGGTTACTTCTAATGCACGTTGA 38857 |||||||| || || |||||||| || | || ||||| | | | | ||| || Sbjct 110463 TTGATATCGGTAATTTCCAGTTCACCTCTTGCAGAAGGTTTAATGTTTTTGGCAATTTCG 110404 Query 38858 ATAACAGAGTTATCATAGAAATACAAACCTGTGACAGCATAATCTGATTTAGGATTTTCA 38917 | ||| ||||||||| ||||| | || | ||||| |||| ||||||||| ||| Sbjct 110403 ACTACATTGTTATCATAAAAATAAAGTCCGGGTACAGCGTAATTTGATTTAGGCTTTAAT 110344 Query 38918 GGTTTCTCTTCAATAGAAATAGCTTGACGATTACTCCCAAATTCAACCACACCGAATCGT 38977 || || ||||||||||||| |||| ||| | ||||||| || ||||| ||| | Sbjct 110343 GGCTTTTCTTCAATAGAAACCGCTTTCAGATCTTTGTCAAATTCTACAACACCATATCTT 110284 Query 38978 TCAGGATC 38985 |||||||| Sbjct 110283 TCAGGATC 110276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472617284506400