Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq50 190 1e-42
seq299 102 5e-16
seq966 96.9 2e-14
seq610 93.3 3e-13
>seq50
Length=143579
Score = 190 bits (210), Expect = 1e-42
Identities = 600/917 (65%), Gaps = 12/917 (1%)
Strand=Plus/Minus
Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGT 475426
||||| || ||| ||||||| || || |||||||| ||||| || | || ||| | |
Sbjct 57111 ACAGCAGGCGATACACATCTAGGAGGAGAAGATTTCGATAACCGAATGGTCTCACATTTT 57052
Query 475427 GTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAA--AGCATTAA 475484
|| ||||| || || | || ||||| || | ||||| | | || ||||||
Sbjct 57051 GTGGAAGAGTTTAAACGTAAGAATAAGAAGGACATCTCAAC--CAACAAACGAGCATTGC 56994
Query 475485 GACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTA 475544
| ||||| | || |||||||||||||| ||||| || | || | | || || | |
Sbjct 56993 GTCGTCTGCGTACGGCTTGTGAACGTGCGAAGCGCACTTTGTCAGCATCAACCCAGGCAA 56934
Query 475545 CTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTA 475604
||||| | ||||| ||||| ||||| ||||||| | ||| || || || ||
Sbjct 56933 GCATTGAAATCGATTCGCTTTTCGAAGGGATTGATTTCTACACTTCGATGACGAGAGCCC 56874
Query 475605 AATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTC 475664
|||||||| | ||| ||| | || | | || || ||||| || | ||| |
Sbjct 56873 GTTTTGAAGAACTCAATTCAGATTTGTTCCGTGACACGATGGAACCAGTGGCTAAAGCCC 56814
Query 475665 TCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAA 475724
| | || | || | || ||| | | || || || ||| | || || |||||||
Sbjct 56813 TACGGGACGCCAAGATGGATAAAGGTAATATACACGACATAGTTTTGGTTGGTGGTTCAA 56754
Query 475725 CAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAAT 475783
| | ||||| || || ||||| | || || | || ||||| || | || |||
Sbjct 56753 CTCGGATTCCGAAGGTAC-AGAAACTTCTGCAGGATTTCTTCAATGGGAAGGAATTGAAT 56695
Query 475784 GAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTA 475843
|| | || || ||||||||||| ||||| || ||||| || ||||| || || ||
Sbjct 56694 AAATCCATCAACCCCGATGAAGCTGTCGCATACGGTGCTGCAGTACAAGCGGCAATCTTG 56635
Query 475844 TCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTG-ACGTAACTCCACTTTC 475902
|||| | | ||| | | || | | |||||| | || || ||||| ||
Sbjct 56634 CAAGGTGATACTTCGGAGGCGGTCCAGGATTTACTT-TTGTTGGATGTCACGCCACTGTC 56576
Query 475903 ATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT 475962
|||||| | ||||| | |||||| | ||||| ||| || | ||||||| | ||
Sbjct 56575 ATTAGGAATCGAAACGGCTGGAGGAGTAATGACCGTTCTGATCAAGCGAAATACCACGAT 56516
Query 475963 CCC-ATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCA 476021
|| | | | ||| | ||| ||| | || || || || |||||| | || |
Sbjct 56515 ACCGACGAAGCAAACCCAAAC-ATTCACTACCTACTCGGACAATCAACCTGGCGTTCTGA 56457
Query 476022 TCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTA 476081
| ||| |||||||||| ||| | | || ||||| || || ||||||| |||
Sbjct 56456 TTCAAGTCTTTGAAGGAGAACGGGCCATGACGAAAGACAACAATCTTCTTGGAAAATTTG 56397
Query 476082 ATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATA 476141
| || |||||||| |||||||| | ||||| || || |||||||| || || ||||
Sbjct 56396 AACTCAGTGGTATTCCACCTGCTCCGCGCGGAGTGCCACAGATTGAAGTCACATTCGATA 56337
Query 476142 TTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAA- 476200
||||||| || ||||| | ||||| ||||| ||| ||||| | |||||| || |||
Sbjct 56336 TTGATGCCAACGGTATCATGAATGTATCTGCTATTGAGAAATCGACTAACAA-AGAAAAT 56278
Query 476201 AATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTT 476260
||| || || || ||| || || | | | | |||| | || | ||||||||
Sbjct 56277 CGTATCACAATCACTAACGATAAGGGACGTCTAAGTAAAGAGGACATAGATCGTATGGTG 56218
Query 476261 GATGAAGCCAAAGAGTT 476277
|||| || || ||||
Sbjct 56217 AATGAGGCGGAAAAGTT 56201
Score = 147 bits (162), Expect = 1e-29
Identities = 252/360 (70%), Gaps = 8/360 (2%)
Strand=Plus/Minus
Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577
||||| ||| | ||||| |||||||| ||||||||| | || ||||| |||||||
Sbjct 57570 GATGCGAAACGGTTGATCGGTCGTAAGTTTGATGATCCAACGGTCCAGAGTGATATGAAG 57511
Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AATACACG 474635
|| ||||| || | || |||| || | ||||||||| | | ||| |||| | |
Sbjct 57510 CACTGGCCGTTCGAAGTAATAAGTGACGCTGGTAAACCGAAACTGCAAGTGGAATATAAG 57451
Query 474636 CAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGA 474695
| |||| || || ||||| ||||| || | || || ||||| | || ||||
Sbjct 57450 GGCGAGAAAA-AATCATTTTTC-CCGGAGGAAGTCTCATCGATGGTGCTCATTAAGATGA 57393
Query 474696 AACAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCC 474753
| |||| || |||| || ||||| || | | | |||| || || || || ||
Sbjct 57392 AGGAAACTGCTGAAGCT--TACCTTGGGAAAAATATTGCAAATGCTGTTATAACAGTACC 57335
Query 474754 AGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCT 474813
|| || |||||||||||||| ||||||||||| || ||||| || ||| || || |
Sbjct 57334 TGCGTACTTTAATGATTCTCAGCGTCAAGCAACAAAGGATGCAGGTGCAATAGCTGGCTT 57275
Query 474814 TAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873
||||| ||||||| || || ||||| ||||| |||||| |||| || || | |||||
Sbjct 57274 GAATGTGCTACGTATCATCAACGAACCGACAGCTGCCGCAATTGCGTACGGGTTGGATAA 57215
Score = 118 bits (130), Expect = 7e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
||| | || |||||||| || || || || ||||||| || | || |||| ||
Sbjct 57834 GCAGTCGGCATTGATTTGGGGACGACGTATTCGTGTGTAGGAGTGTTCCAGCATGGAAAG 57775
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|| || || ||||| ||||| ||||| ||| | ||||||||||| ||||| |||||||
Sbjct 57774 GTTGATATTATTGCGAATGATCAAGGCAATCGGACAACACCATCTTATGTGGCTTTTACC 57715
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| || || | |||||||| ||||| || ||| |||||| ||| ||||| ||||
Sbjct 57714 GATACCGAGCGGCTTATTGGTGATGCAGCCAAAAATCAAGTAGCAATGAATCCAAATAAT 57655
Query 474509 ACTATTTTTG 474518
|| |||||||
Sbjct 57654 ACCATTTTTG 57645
>seq299
Length=69886
Score = 102 bits (112), Expect = 5e-16
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159
|||||||| || || || || || || |||||||| |||| ||||| | || ||||||
Sbjct 6003 GATTTTTCTTCGCCCAACATCGCTAAAGAAATGCACGTTGGGCACTTACGGTCCACAATA 5944
Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219
|| || || ||| |||| || | |||||||| || || || |||| |||
Sbjct 5943 ATAGGAGATTCTATTTGCCGATTTCTTGAATTTTTGCGACACGATGTTTTGCGAATCAAT 5884
Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260
||||| ||||||||||||||||| ||||||||| | || ||
Sbjct 5883 CATATCGGTGATTGGGGAACACAGTTTGGTATGCTTATCGC 5843
>seq966
Length=353950
Score = 96.9 bits (106), Expect = 2e-14
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| || ||||| || || ||| || || || || || | |||||
Sbjct 217 ACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGAGT 158
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || || ||||||||||| || |||||||| || ||||| ||||| || ||
Sbjct 157 ACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCC 98
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||| || |||||||| || || ||||| ||||| | || | | || |
Sbjct 97 TTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA-CCTCCA 39
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766
| || || || || || || || ||||| ||||||||
Sbjct 38 GAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAAT 2
Score = 96.9 bits (106), Expect = 2e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| || ||||| || || ||| || | || || || | || ||
Sbjct 445 ACGAAGACGGAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGT 386
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || || ||||||||||| || |||||||| || ||||| |||||||| ||
Sbjct 385 ACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCC 326
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||| || |||||||| || || ||||| ||||| | || | | || |
Sbjct 325 TTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGA-CCTCCA 267
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||| || || || || || || ||||| |||||||| ||
Sbjct 266 GGGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTG 227
>seq610
Length=159711
Score = 93.3 bits (102), Expect = 3e-13
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| ||||| ||||| || || ||| || | || || || | |||||
Sbjct 159566 ACGAAGACGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGT 159507
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || || ||||||||||| || |||||||| || ||||| ||||| || ||
Sbjct 159506 ACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCC 159447
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||| || |||||||| || || ||||| ||||| | || | | || |
Sbjct 159446 TTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA-CCTCCA 159388
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || || || || || ||||| |||||||| ||
Sbjct 159387 GAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTG 159348
Score = 87.8 bits (96), Expect = 1e-11
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || ||||| || || ||| || | || || || | |||||
Sbjct 159338 ACGGAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGT 159279
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || || ||||||||||| || |||||||| || ||||| ||||| || ||
Sbjct 159278 ACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCC 159219
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||| || |||||||| || || ||||| ||||| | || | | || |
Sbjct 159218 TTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA-CCTCCA 159160
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || || || || || ||||| |||||||| ||
Sbjct 159159 GAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTG 159120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268083973428560
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