Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1047 122 4e-23 >seq1047 Length=31309 Score = 122 bits (134), Expect = 4e-23 Identities = 236/346 (68%), Gaps = 2/346 (1%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || ||||| |||||||||| || || || | || || || | | ||||| Sbjct 17971 CTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTC 18030 Query 25990 TTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTA 26048 ||| || ||| |||||||||||||| || || ||||| | ||| |||||||| || | Sbjct 18031 TTTGCCAGTG-TTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCA 18089 Query 26049 AATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTT 26108 |||||||||||| || || || || ||||| || || || | |||||| | Sbjct 18090 GATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTAT 18149 Query 26109 CATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCT 26168 |||| | || || ||| || ||||| || | |||| || || || | ||| | Sbjct 18150 TATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATAT 18209 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228 | |||| ||| ||||| ||| ||| | || || ||||||||| |||| || | Sbjct 18210 ATGTTCCTTTCGCCCTAATGCAGTGTACATTCAGGCCTATGCCACCAGCCGATTTAGAGA 18269 Query 26229 TAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATC 26274 | ||||| | | || |||||| ||||||| | |||||||| Sbjct 18270 TCAAGGCACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATC 18315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253033153686500