Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq372 156 6e-33 >seq372 Length=50997 Score = 156 bits (172), Expect = 6e-33 Identities = 372/558 (67%), Gaps = 6/558 (1%) Strand=Plus/Minus Query 47751 AGATTCCTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATC 47810 ||| | ||| || |||| || || |||| | | || |||||||| ||||| || || Sbjct 40141 AGACTTCTCCACGAACTCGCGCACCGAATGTGTCTCGCCGGTGGCAATGACAAAGTCTTC 40082 Query 47811 AGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCA 47870 |||| || || || | ||| | |||||| ||||| ||||| || | || || ||||| Sbjct 40081 CGGTTTCTCCTGCTGCATCATCAGCCACATCGCCTCCACATAGTCCTTCGCGTGACCCCA 40022 Query 47871 GTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGC 47930 ||| || | ||| ||||| || || | | || || |||| || || ||| | Sbjct 40021 GTCTCGCTTGGAATCGAGATTACCCAGCTCGACGCATTCCTGCTGCCCG--AGCGATATC 39964 Query 47931 TTTT--AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCA 47988 || | | | || |||||||| || |||||| | || || |||| || |||||| Sbjct 39963 TTCGCGACCGAACGAGTGATCTTACGGGTCACAAAATTCTCTCCGCGTCGGGGCGATTCA 39904 Query 47989 TGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACT 48048 || || || ||||| || | |||||| |||| |||| | || || || || | || Sbjct 39903 TGGTTGAACAGAATCCCGTTGCAGGCAAACATATCGTACGCCTCGCGGTAATTGATCACG 39844 Query 48049 ATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTC 48108 |||||||| || || | || ||| |||| || || || |||||||| || || || Sbjct 39843 ATCCAGTATCCGTACATCTTGGCACATGCATACGGCGAGCGGGGATAGAAGGGAGTTTTC 39784 Query 48109 TCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATA 48168 || |||| || ||||| ||| || || || || || |||||||||||| |||| Sbjct 39783 TCGTTCTGGGGTGTCTCGACCACTTTGCCGTACAGCTCGGAGGTGGATGCTTGGTAGAAG 39724 Query 48169 CGAACC-CTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTAT 48227 || ||| || || |||| | | | | || | || || |||| | || || || | Sbjct 39723 CGTACCGCTTTC-TCCAGCCCCACCGTTCGAATGGCATCCAGCAGCCGCAACGTACCGAC 39665 Query 48228 GGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGTGC 48287 |||||| | | || |||||| | || || |||| ||| || || |||||||| Sbjct 39664 GGCATCCACTTCCGCCGTGTACTCGCTGAGATCGAAAGAAATCTTCACGTGGCTCTGTGC 39605 Query 48288 CCCAAGATTATAAATCTC 48305 | | ||| || || || Sbjct 39604 GGCCAAATTGTAGATTTC 39587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665475932530400