Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1047 158 1e-33 >seq1047 Length=31309 Score = 158 bits (174), Expect = 1e-33 Identities = 359/538 (67%), Gaps = 9/538 (2%) Strand=Plus/Minus Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953 |||||||| || |||||| || || ||||||||||| ||||| || || |||| Sbjct 17807 AATCACAGGTTGAAACTGGAGTGCCTTACATGCTTTACAAAGATGCGTGCAATCGTAAGA 17748 Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013 ||||||| | ||| | ||||| |||||| | ||||| || ||||| |||||| |||| | Sbjct 17747 GTAACCAGCAAAATATCGGAACGATCAAGTGTTCAAACCTGTGCACCGAAATTGTAGAAT 17688 Query 76014 ACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATG 76073 || | || ||||| | ||||| || || |||| || || ||| | | || || Sbjct 17687 ACTCTTCAAAAGATGAAATTGCTGTGTGTAACCTGGCCTCGATTGCCTTAAACATGTTTG 17628 Query 76074 TCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTA 76133 | || || ||| || | ||||| | ||| || | ||| | | || | ||||| Sbjct 17627 TGAAACCCGA---TCGTACATATGATTTCGCAAAGCTAAAGGAAGTAGCCAAAACTGTTA 17571 Query 76134 CCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTT---GAGACTGCGCGAA 76190 | || ||||| ||| | |||| || | ||||| |||||| ||| || | |||| Sbjct 17570 CTAAGAATCTTAACAAAATCATCGATATAAATTATTATCCTGTTCCGGAAGCAAAGCGA- 17512 Query 76191 AGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTA 76250 || |||||||| ||| | || || || | || || ||||| | || |||| || | Sbjct 17511 --TCCAATATGCGCCACCGTCCGATAGGGATCGGAGTGCAAGGCATGGCAGATGCTTTCA 17454 Query 76251 TTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTG 76310 | ||| ||| || | | || || |||||| || | ||||| | || |||| Sbjct 17453 TCTTGATGCGCCACCCTTACGAAAGTGAAGAAGCCCAGCTGTTGAATCAACAAATGTTTG 17394 Query 76311 AAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCT 76370 ||||||| || || | |||| || ||||| || |||||||| | | | ||| | | Sbjct 17393 AAACCATTTACTTCGGAGCCCTTGAAGCGAGCTGCGAATTGGCCGCACAGGATGGTCCAT 17334 Query 76371 ATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGA 76428 | || ||| ||| || ||| | | |||| | ||||||| || |||||||| Sbjct 17333 ACGAATCATATGATGGAAGTCCAGTTAGCAAAGGAATCCTTCAGTACGACATGTGGGA 17276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596553045193600