Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq636 138 1e-26 seq14 125 9e-23 seq1672 123 3e-22 >seq636 Length=183128 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| || |||||||| ||||| ||||| | || Sbjct 2880 GCTTGGCCAGCTCACCGGGCAGCAGCAGACGAACGGCGGTTTGGATTTCGCGAGACGTGA 2821 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| |||||||| |||| ||||||||| || |||| | ||||||| |||| | Sbjct 2820 TCGTCGAACGCTTGTTGTAGTGTGCCAGACGGGACGCTTCGGCGGCGATGCGCTCGAAGA 2761 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| ||||| |||||||| ||||| ||| ||||||||| || |||| Sbjct 2760 TATCGTTCACAAAGCTGTTCATGATGCTCATCGCCTTCGAGGAGATGCCGGTATCCGGGT 2701 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||||||||| Sbjct 2700 GGACCTGCTTCAGCACCTTGTAGATG 2675 >seq14 Length=264275 Score = 125 bits (138), Expect = 9e-23 Identities = 165/224 (74%), Gaps = 11/224 (5%) Strand=Plus/Plus Query 869178 AACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCT 869237 ||||||| ||||| ||||| |||||| || | || || ||||| ||||| |||| Sbjct 132316 AACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGCCACGCT 132375 Query 869238 TCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 869296 |||| ||||| |||||||| ||| || ||||| ||| ||||| ||||||||||| || Sbjct 132376 TCTTTAGCCAGAAGATGGCAGCA-AAGCTGCCACTGAAGAAGATACCCTCGACGGCTGCG 132434 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATC 869353 || | | || |||||| | || | || ||| |||| | |||||| |||||| Sbjct 132435 AACGCCACGATACGCTCGCCGTAGTT----AG--CCTTCTTGCTCGAGATCCAGTTCATC 132488 Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 |||||||| ||||| | |||| |||||| ||| |||||||| Sbjct 132489 GCCCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGC 132532 >seq1672 Length=328746 Score = 123 bits (136), Expect = 3e-22 Identities = 239/348 (69%), Gaps = 6/348 (2%) Strand=Plus/Minus Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954 |||||| ||||| || || || |||| ||| || || || ||| |||| |||| Sbjct 204063 GGGTCCTCCCGGTGTTGGTAAAACTACGACCATTCTCTGCCTTGCCCGTATCCTGCTGGG 204004 Query 1573955 -CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACG 1574013 | | | ||| || ||||||||||| || ||||| ||| |||| || || |||| | Sbjct 204003 ACCCAACTTCCGT-GAAGCCGTGCTCGAGCTGAACGCATCGAACGAACGGGGTATCGATG 203945 Query 1574014 TCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCC 1574073 | ||||| || | |||||| ||| ||| | | ||||||| || | | Sbjct 203944 TGGTGCGAAACAAAATCAAGATGTTTGCCCAGCAGAAGGTAACACTGCCGCGTGGTAGAC 203885 Query 1574074 ACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGC 1574133 ||||| | | || ||||||||||| ||| || | || || |||||||||||||| Sbjct 203884 ACAAGATCGTGATTCTCGACGAGGCGGACAGCATGACCGAGGGTGCCCAGCAGGCCCTTA 203825 Query 1574134 GGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGT 1574193 || || ||||||| ||| ||||||||||||||| || ||||| ||||||||| Sbjct 203824 GGCGTACGATGGAAATTTACAGCAACACGACGCGCTTCGCGCTGGCCTGCAACACGAGTG 203765 Query 1574194 CGATGGTCATCGAGGCCCTCCAAAGTCGC--TGCGCCATTCTGCGCTT 1574239 | | ||||||| | ||| |||||| ||||| || ||||| || Sbjct 203764 AAAAGATCATCGAACCGATCC--AGTCGCGGTGCGCAATGCTGCGTTT 203719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106957016403740