Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq636 138 1e-26
seq14 125 9e-23
seq1672 123 3e-22
>seq636
Length=183128
Score = 138 bits (152), Expect = 1e-26
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||| || |||||||| ||||| ||||| | ||
Sbjct 2880 GCTTGGCCAGCTCACCGGGCAGCAGCAGACGAACGGCGGTTTGGATTTCGCGAGACGTGA 2821
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
|||| |||||||| |||| ||||||||| || |||| | ||||||| |||| |
Sbjct 2820 TCGTCGAACGCTTGTTGTAGTGTGCCAGACGGGACGCTTCGGCGGCGATGCGCTCGAAGA 2761
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| ||||| ||||| |||||||| ||||| ||| ||||||||| || ||||
Sbjct 2760 TATCGTTCACAAAGCTGTTCATGATGCTCATCGCCTTCGAGGAGATGCCGGTATCCGGGT 2701
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||| |||||||||||||||
Sbjct 2700 GGACCTGCTTCAGCACCTTGTAGATG 2675
>seq14
Length=264275
Score = 125 bits (138), Expect = 9e-23
Identities = 165/224 (74%), Gaps = 11/224 (5%)
Strand=Plus/Plus
Query 869178 AACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCT 869237
||||||| ||||| ||||| |||||| || | || || ||||| ||||| ||||
Sbjct 132316 AACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGCCACGCT 132375
Query 869238 TCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 869296
|||| ||||| |||||||| ||| || ||||| ||| ||||| ||||||||||| ||
Sbjct 132376 TCTTTAGCCAGAAGATGGCAGCA-AAGCTGCCACTGAAGAAGATACCCTCGACGGCTGCG 132434
Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATC 869353
|| | | || |||||| | || | || ||| |||| | |||||| ||||||
Sbjct 132435 AACGCCACGATACGCTCGCCGTAGTT----AG--CCTTCTTGCTCGAGATCCAGTTCATC 132488
Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397
|||||||| ||||| | |||| |||||| ||| ||||||||
Sbjct 132489 GCCCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGC 132532
>seq1672
Length=328746
Score = 123 bits (136), Expect = 3e-22
Identities = 239/348 (69%), Gaps = 6/348 (2%)
Strand=Plus/Minus
Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954
|||||| ||||| || || || |||| ||| || || || ||| |||| ||||
Sbjct 204063 GGGTCCTCCCGGTGTTGGTAAAACTACGACCATTCTCTGCCTTGCCCGTATCCTGCTGGG 204004
Query 1573955 -CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACG 1574013
| | | ||| || ||||||||||| || ||||| ||| |||| || || |||| |
Sbjct 204003 ACCCAACTTCCGT-GAAGCCGTGCTCGAGCTGAACGCATCGAACGAACGGGGTATCGATG 203945
Query 1574014 TCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCC 1574073
| ||||| || | |||||| ||| ||| | | ||||||| || | |
Sbjct 203944 TGGTGCGAAACAAAATCAAGATGTTTGCCCAGCAGAAGGTAACACTGCCGCGTGGTAGAC 203885
Query 1574074 ACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGC 1574133
||||| | | || ||||||||||| ||| || | || || ||||||||||||||
Sbjct 203884 ACAAGATCGTGATTCTCGACGAGGCGGACAGCATGACCGAGGGTGCCCAGCAGGCCCTTA 203825
Query 1574134 GGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGT 1574193
|| || ||||||| ||| ||||||||||||||| || ||||| |||||||||
Sbjct 203824 GGCGTACGATGGAAATTTACAGCAACACGACGCGCTTCGCGCTGGCCTGCAACACGAGTG 203765
Query 1574194 CGATGGTCATCGAGGCCCTCCAAAGTCGC--TGCGCCATTCTGCGCTT 1574239
| | ||||||| | ||| |||||| ||||| || ||||| ||
Sbjct 203764 AAAAGATCATCGAACCGATCC--AGTCGCGGTGCGCAATGCTGCGTTT 203719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106957016403740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |