Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1047 354 7e-93 seq673 120 3e-22 seq111 109 5e-19 seq122 107 2e-18 seq966 100 3e-16 seq610 98.7 9e-16 >seq1047 Length=31309 Score = 354 bits (392), Expect = 7e-93 Identities = 1168/1797 (65%), Gaps = 59/1797 (3%) Strand=Plus/Plus Query 138151 GATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATT 138210 ||||| || || || |||| || |||| | | |||||||| || | | ||||||||| Sbjct 16727 GATTTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACAT- 16785 Query 138211 CCCGTTTTTAA--CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAG 138268 |||| |||||| ||||| |||| || |||| | || || || || ||| |||| Sbjct 16786 CCCGGTTTTAAGGCCCATCTTCC-AGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGT 16844 Query 138269 TCGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAA 138328 | || | || | || || || || || || || ||||| || ||||| || Sbjct 16845 TTGGCTCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGG 16904 Query 138329 TGGCCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAA 138388 ||||| || || || |||| |||||||| || || ||||| |||| || | Sbjct 16905 CCGCCATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGA 16964 Query 138389 TATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTT---GGCCGCAATGATGCGAT 138445 | ||| |||| ||| | || ||||| || || || |||| ||| || | Sbjct 16965 TGTGTTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTG---T 17021 Query 138446 TTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTA 138505 | |||| ||||||| |||| | ||| | | | || |||| || || || | Sbjct 17022 TCTTCATTTCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCA 17081 Query 138506 TGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAA 138565 || ||||| || || | | ||| | |||| ||| | || ||| | || |||| Sbjct 17082 CTACTTGAAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAA 17141 Query 138566 ACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAA 138625 | ||||||||||| || || || || || || | |||||||||||| ||| | | | Sbjct 17142 AAGATTCGTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCA 17201 Query 138626 GAGAATTCCGTAAACC--GTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAA 138683 | ||||| || | || ||| | ||| || || ||| | ||| |||||||| Sbjct 17202 GGGAATTGCGCACGCCATGTGTCACAATATTTCTT--TTAAGCTCAGCCCAATCCCACAA 17259 Query 138684 ATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCC 138743 || |||| || || | |||||| |||||||| | ||||| || | ||||| || Sbjct 17260 TTCCGTAGGCTTCTTCTCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCC 17319 Query 138744 TTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACC 138803 || || || |||||| |||| || | ||||| ||| |||||| || || || || Sbjct 17320 ATCATATGATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCC 17379 Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGG 138863 ||||||| ||||| || || ||||| | || |||| || | || ||||| || Sbjct 17380 GAAGTAAATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGG 17439 Query 138864 CATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATG 138923 ||| | || |||| || || |||| |||||||| || | || | || || || Sbjct 17440 GTGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTG 17499 Query 138924 GCGCAGATTTGA-CGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATTT 138979 ||||| ||| || |||||| ||||| | ||||||||| |||| ||||||||||| Sbjct 17500 GCGCATATTGGATCGCTTT----GCTTCCGGAACAGGATAATAATTTATATCGATGATTT 17555 Query 138980 TGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTT-CAAAATCGTATGTG 139038 || |||| ||| | | || || | | | | || | | || | ||||| ||||| Sbjct 17556 TG-TTAAGATTCTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAATCATATGT- 17613 Query 139039 CCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCAC 139098 || | || | ||||| |||| | ||||||||| | ||| ||| Sbjct 17614 ---ACGAT--------CGGGTTTCACAAACATGTTTAAGGCAATCGAGGCCAGGTTACAC 17662 Query 139099 ACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTG 139158 || || | ||| || |||||| |||||||||| |||| || ||||||| Sbjct 17663 ACAGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTG 17722 Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218 ||||| || | |||||| || || || || || || || ||||||||||||||||| || Sbjct 17723 ATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAA 17782 Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAAC---AAGTCCCTAGCTTGT 139275 || |||||||| || |||| |||||||| | |||| || || || | | Sbjct 17783 GGCACTCCAGTTTCAACCTGTGATTCTATAAT---TGCGAACCATAAATCTTGTGCCTTT 17839 Query 139276 ATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCA 139335 | |||||| | || | | ||||||||||| |||||||| ||||| ||| Sbjct 17840 ACTTGACGGGTGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCA 17899 Query 139336 CCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTC 139395 || | | || || | | |||| | || ||| ||||| || ||| | |||| Sbjct 17900 CCCCATGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAGACTCCACATTTCGTTG 17959 Query 139396 GCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGC--GCG 139453 || | || ||| |||||||| ||| |||||||||| ||| | | || || | ||| Sbjct 17960 GCTTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCG 18019 Query 139454 CCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGT 139513 | | ||||| || |||| ||| | | | || ||||| || || | | Sbjct 18020 CGGAC--CTCTTCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCAT 18077 Query 139514 GCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGT 139570 ||||||| ||||||||||| || | || || || ||| || ||||| || || | Sbjct 18078 GCCATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACAT 18137 Query 139571 GTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGT----TCCG 139626 ||| ||| ||||||| | ||||||| |||||| | | |||| ||| | | || Sbjct 18138 AACGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCG 18197 Query 139627 TTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCG 139686 || ||| | ||| || | || | | | |||||||| | ||| || || Sbjct 18198 TTCCTGCAATATATGTTCCTTT----CGCCCTAATGCAGTGTACATTCAGGCCTATGCCA 18253 Query 139687 CCGCCAAATTTGGATATTAAAACGCAATCGCGTAA-TGTCTCGTATATACCTCTTATGCT 139745 || | |||| || || || | || | | ||| || ||||| || || ||||| Sbjct 18254 CCAGCCGATTTAGAGATCAAGGCACACT-GTTTAAGAGTATCGTAAATTCCCTCGATGCT 18312 Query 139746 GTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGC 139805 |||||| ||| |||| ||| ||||| ||||| |||||||| ||| || | || || Sbjct 18313 ATCGTCCGACATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGC 18372 Query 139806 AAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGAT 139865 ||||| || || |||||||| || | | | |||| ||| | |||||| ||||| Sbjct 18373 AAACATGGTTGGCGAAGCGTGCGTAAAGTATCGCTCTGACAGCAAATTGTACGTCTCGAT 18432 Query 139866 GGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 ||| ||||||| || || || |||| || || ||||| ||||| ||||| Sbjct 18433 GGCAGAATCAATATCTTCACCATGTATGCCGATAGCAACACGCATGAGCATGTGTTG 18489 >seq673 Length=25255 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | |||||||| ||||| || || || || ||||| || || |||| | Sbjct 24639 ATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGA-GCCATC 24581 Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | |||| | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 24580 GGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 24521 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || ||||||||||| | | | | || || || || Sbjct 24520 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTACAA 24461 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || || | ||| ||||| | || || || Sbjct 24460 CATCCAGAAGGAGTCGACCCTGCATCTTGTGCTGCGACTTCGTGGTGG 24413 >seq111 Length=461598 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||||||||| | ||||| || || ||||| || || || || || || || || Sbjct 359881 ACGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCC 359822 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || || | || | || || |||||||| ||||| || || || || || ||| Sbjct 359821 TCGGATACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGAT 359762 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| | ||||| || || || |||||||| || | | |||| || || Sbjct 359761 CAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGACGGACGTACTCTGTCCGACTAC 359702 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| ||||||||||| || || ||||| |||| |||| || || Sbjct 359701 AATATTCAGAAGGAATCGACGCTTCATCTGGTGCTGCGCCTGCGTGGTGG 359652 >seq122 Length=254344 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | || || || || || || || || || || | | Sbjct 68678 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCG 68619 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || ||||| Sbjct 68618 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 68559 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| ||||| || |||||||| || | | | |||| || |||||| Sbjct 68558 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAAC 68499 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || |||||||| | || |||| || || Sbjct 68498 ATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGTGG 68452 >seq966 Length=353950 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||| || | || || || || || || || || || || || || || |||| | Sbjct 224 ATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACCCTGGAGGTCGA-GCCATC 282 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| ||| | || | || || ||||| || || || ||||| || ||||| ||||| Sbjct 283 CGATACAATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATTCCTCCAGATCA 342 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || |||||||||||| | | |||| || || || Sbjct 343 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACGCTGTCCGACTACAA 402 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| |||||||||||||| || || Sbjct 403 CATCCAAAAGGAATCGACTCTCCA 426 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-CCGACACAGTAGAAAC 24777 || || || || || || || || || || || || || |||| |||| || | || | Sbjct 11 AAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGA-GCCATCCGATACGATTGAGAA 69 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 || || ||||| || || || ||||| || ||||| ||||| || ||| | ||||| Sbjct 70 CGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGTCTTATCTT 129 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 || || || |||||||||||| | | |||| || || |||||||| |||||||| Sbjct 130 CGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCAGAAGGAATC 189 Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || ||||| | || | || ||||| Sbjct 190 GACTCTCCATCTGGTGCTCCGTCTTCGTGGAGG 222 >seq610 Length=159711 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||| || | || || || || || || || || || || || || || |||| | Sbjct 159117 ATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGA-GCCATC 159175 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| || | || | || || ||||| || || || ||||| || ||||| ||||| Sbjct 159176 CGATACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCA 159235 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || |||||||||||| | | |||| || || || Sbjct 159236 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAA 159295 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||||||||| || || ||||| | || | || ||||| Sbjct 159296 CATCCAGAAGGAATCGACTCTCCATCTGGTGCTCCGTCTCCGTGGAGG 159343 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||| || | || || || || || || || || || || || || || |||| | Sbjct 159345 ATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGA-GCCATC 159403 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| || | || | || || ||||| || || || ||||| || ||||| ||||| Sbjct 159404 CGATACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCA 159463 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || |||||||||||| | | |||| || || || Sbjct 159464 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAA 159523 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||||||||| || || |||| |||| Sbjct 159524 CATCCAGAAGGAATCGACTCTCCATCTGGTACTGCG 159559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449885115341600