Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq154 159 3e-34 >seq154 Length=26053 Score = 159 bits (176), Expect = 3e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 ||||| |||| ||||| || || || |||||||| || || ||||| ||||| || | Sbjct 20564 TTGTAGTCGAATTGCGTCTGAGCACCGAGCTCGCATCCAAAATACTTGGTCGGATAGGTT 20623 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || ||||| |||| ||| || | |||| |||||| |||||||| |||||||||||| Sbjct 20624 GCAGGACGGCCAATGGCCCGAGCAACCTCGGCCATGTTCACGATGACCGTCTTGATGCCG 20683 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || ||||| ||||| ||||| || |||||| ||||| ||||| |||||||| ||| Sbjct 20684 TTACCCTTGCCTTCTACCTTCGCATTGATGCGAGGCATCTTGTACCGGTAGAAGATGTCG 20743 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647 | ||||| ||||| ||||| || || |||| ||| Sbjct 20744 GTGACATTACGGTTTACGTTGACGGTAGCCATGGTG 20779 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| ||||| || | ||||| ||||| | |||||| | | || | || || | Sbjct 20258 CGGTGGGTTCTTGATAATGAACGTGTTCACCTTATGGTTCACCTCGAGTGGCCCATGGAA 20317 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 |||||| || ||||| ||||| | || | ||| || | || |||||||| || || Sbjct 20318 ACCGCAAGCCTTGCAACCCTGCGAAATGGTTCCCTTCTTCGACGATACGATGAGATCGGT 20377 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||||| ||||| || ||||| || | ||| |||||||| ||||| || |||||||| || Sbjct 20378 TTCCGGATTGTCGCACTCCGGGCAGAGCACGAACTTGCGAATGAAGCCGTCAAGCAGATC 20437 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| | || || || || || || |||||||||||||| Sbjct 20438 CTGCAGCTTCGTCGCATCATGCGAACCATTCACAATGAATCGTTCGTT 20485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412830430054460