Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq636 174 2e-37 seq1672 107 3e-17 seq14 107 3e-17 >seq636 Length=183128 Score = 174 bits (192), Expect = 2e-37 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| || ||||| |||||||||||| ||||||| || ||| ||| Sbjct 2919 TGTACTTGGTGACGGCCTTCGTTCCCTCGGAGACGGCGTGCTTGGCCAGCTCACCGGGCA 2860 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| || |||||||| ||||| ||||| | |||||| |||||||| | Sbjct 2859 GCAGCAGACGAACGGCGGTTTGGATTTCGCGAGACGTGATCGTCGAACGCTTGTTGTAGT 2800 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| ||| || |||| | ||||||| |||| || ||||| ||||| ||||| Sbjct 2799 GTGCCAGACGGGACGCTTCGGCGGCGATGCGCTCGAAGATATCGTTCACAAAGCTGTTCA 2740 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || ||||||||| || ||||| |||||||| |||||||||| Sbjct 2739 TGATGCTCATCGCCTTCGAGGAGATGCCGGTATCCGGGTGGACCTGCTTCAGCACCTTGT 2680 Query 1485710 A 1485710 | Sbjct 2679 A 2679 >seq1672 Length=328746 Score = 107 bits (118), Expect = 3e-17 Identities = 205/300 (68%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164 || ||||||||||| || || || || |||| || || | || || ||||| | | Sbjct 203990 GAAGCCGTGCTCGAGCTGAACGCATCGAACGAACGGGGTATCGATGTGGTGCGAAACAAA 203931 Query 2019165 ATCAAGCATCACGCTT--CGAAAAGAATCGACC--TGCCGCCCGGCCGCCACAAGGTGAT 2019220 |||||| | | || | | |||| | | |||||| || | |||||| | | Sbjct 203930 ATCAAG----ATGTTTGCCCAGCAGAAGGTAACACTGCCGCGTGGTAGACACAAGATCGT 203875 Query 2019221 CATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCAT 2019280 || ||||| ||||| ||| || | || || |||||||||||||| | || || Sbjct 203874 GATTCTCGACGAGGCGGACAGCATGACCGAGGGTGCCCAGCAGGCCCTTAGGCGTACGAT 203815 Query 2019281 GGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCAT 2019340 ||||| |||| |||||||||||| || |||||||||||||||||| | | |||| Sbjct 203814 GGAAATTTACAGCAACACGACGCGCTTCGCGCTGGCCTGCAACACGAGTGAAAAGATCAT 203755 Query 2019341 CGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGAT 2019400 |||| | ||||| || ||||| || |||| || || ||| |||| || ||||| Sbjct 203754 CGAACCGATCCAGTCGCGGTGCGCAATGCTGCGTTTCTCGAAACTCTCCGATGCTCAGAT 203695 >seq14 Length=264275 Score = 107 bits (118), Expect = 3e-17 Identities = 158/221 (71%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 |||||| ||||| ||||| |||||| || || || ||||| ||||| ||||| Sbjct 132317 ACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGCCACGCTT 132376 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||| ||||||||| || ||||| ||| ||||| ||||||||||| || || Sbjct 132377 CTTTAGCCAGAAGATGGCAGCAAAGCTGCCACTGAAGAAGATACCCTCGACGGCTGCGAA 132436 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCC 794517 | |||| ||||| || ||| ||| |||| | |||||| ||||||||| Sbjct 132437 CGCCACGATACGCTC-GCCGTAGT----TAGCCTTCTTGCTCGAGATCCAGTTCATCGCC 132491 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 || || ||||| | |||| | |||| ||| |||||||| Sbjct 132492 CAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGC 132532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916010248474580