Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq636 174 2e-37
seq1672 107 3e-17
seq14 107 3e-17
>seq636
Length=183128
Score = 174 bits (192), Expect = 2e-37
Identities = 183/241 (76%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||||||||| || ||||| |||||||||||| ||||||| || ||| |||
Sbjct 2919 TGTACTTGGTGACGGCCTTCGTTCCCTCGGAGACGGCGTGCTTGGCCAGCTCACCGGGCA 2860
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||| || |||||||| ||||| ||||| | |||||| |||||||| |
Sbjct 2859 GCAGCAGACGAACGGCGGTTTGGATTTCGCGAGACGTGATCGTCGAACGCTTGTTGTAGT 2800
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||| ||| || |||| | ||||||| |||| || ||||| ||||| |||||
Sbjct 2799 GTGCCAGACGGGACGCTTCGGCGGCGATGCGCTCGAAGATATCGTTCACAAAGCTGTTCA 2740
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| || ||||||||| || ||||| |||||||| ||||||||||
Sbjct 2739 TGATGCTCATCGCCTTCGAGGAGATGCCGGTATCCGGGTGGACCTGCTTCAGCACCTTGT 2680
Query 1485710 A 1485710
|
Sbjct 2679 A 2679
>seq1672
Length=328746
Score = 107 bits (118), Expect = 3e-17
Identities = 205/300 (68%), Gaps = 8/300 (3%)
Strand=Plus/Minus
Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164
|| ||||||||||| || || || || |||| || || | || || ||||| | |
Sbjct 203990 GAAGCCGTGCTCGAGCTGAACGCATCGAACGAACGGGGTATCGATGTGGTGCGAAACAAA 203931
Query 2019165 ATCAAGCATCACGCTT--CGAAAAGAATCGACC--TGCCGCCCGGCCGCCACAAGGTGAT 2019220
|||||| | | || | | |||| | | |||||| || | |||||| | |
Sbjct 203930 ATCAAG----ATGTTTGCCCAGCAGAAGGTAACACTGCCGCGTGGTAGACACAAGATCGT 203875
Query 2019221 CATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCAT 2019280
|| ||||| ||||| ||| || | || || |||||||||||||| | || ||
Sbjct 203874 GATTCTCGACGAGGCGGACAGCATGACCGAGGGTGCCCAGCAGGCCCTTAGGCGTACGAT 203815
Query 2019281 GGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCAT 2019340
||||| |||| |||||||||||| || |||||||||||||||||| | | ||||
Sbjct 203814 GGAAATTTACAGCAACACGACGCGCTTCGCGCTGGCCTGCAACACGAGTGAAAAGATCAT 203755
Query 2019341 CGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGAT 2019400
|||| | ||||| || ||||| || |||| || || ||| |||| || |||||
Sbjct 203754 CGAACCGATCCAGTCGCGGTGCGCAATGCTGCGTTTCTCGAAACTCTCCGATGCTCAGAT 203695
>seq14
Length=264275
Score = 107 bits (118), Expect = 3e-17
Identities = 158/221 (71%), Gaps = 7/221 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
|||||| ||||| ||||| |||||| || || || ||||| ||||| |||||
Sbjct 132317 ACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTCAGACCCGGCATCAGGCCACGCTT 132376
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||| ||||| ||||||||| || ||||| ||| ||||| ||||||||||| || ||
Sbjct 132377 CTTTAGCCAGAAGATGGCAGCAAAGCTGCCACTGAAGAAGATACCCTCGACGGCTGCGAA 132436
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCC 794517
| |||| ||||| || ||| ||| |||| | |||||| |||||||||
Sbjct 132437 CGCCACGATACGCTC-GCCGTAGT----TAGCCTTCTTGCTCGAGATCCAGTTCATCGCC 132491
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558
|| || ||||| | |||| | |||| ||| ||||||||
Sbjct 132492 CAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGC 132532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916010248474580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |