Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq111 104 2e-17 seq673 91.5 1e-13 >seq111 Length=461598 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||||||||| ||||||||| ||||| || ||||| || || || | | || || Sbjct 359664 CGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGACAGAGTACGTCCG 359723 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || |||||||| | || | | ||||||||||||||||| ||||| ||| Sbjct 359724 TCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCCCTCCTTG 359783 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| | || | || || || | || || ||||| || || Sbjct 359784 TCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATG 359843 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | |||||| || || |||||||| Sbjct 359844 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878 >seq673 Length=25255 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||||||| | ||| || || || || || || ||||| || |||| || ||| || Sbjct 24425 CGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCG 24484 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| || | |||| | |||||||| || || || ||||| ||| Sbjct 24485 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTG 24544 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| | || | ||||| || | || || || || || || Sbjct 24545 TCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATG 24604 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || | ||||| || || ||||||||||| Sbjct 24605 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTT 24642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385208777413020