Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq50 273 2e-67
seq1457 161 7e-34
seq299 116 3e-20
seq934 96.9 3e-14
seq1077 86.0 5e-11
>seq50
Length=143579
Score = 273 bits (302), Expect = 2e-67
Identities = 858/1318 (65%), Gaps = 16/1318 (1%)
Strand=Plus/Plus
Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440
||||| || || ||| || |||||| || ||||| ||| |||| ||||| |
Sbjct 56261 TTAGTGATTGTGATACGATTTTCTTTGTTAGTCGATTTCTCAATAGCAGATACATTCATG 56320
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
||||| |||||||| | ||| |||||||||||||| || || || || | | ||||||||
Sbjct 56321 ATACCGTTGGCATCAATATCGAATGTGACTTCAATCTGTGGCACTCCGCGCGGAGCAGGT 56380
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
|| || || | | |||| |||| ||| ||| || ||||| || | |||||
Sbjct 56381 GGAATACCACTGAGTTCAAATTTTCCAAGAAGATTGTTGTCTTTCGTCATGGCCCGTTCT 56440
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
|| || || | ||| || ||| ||| |||||| || || || || || ||| | |
Sbjct 56441 CCTTCAAAGACTTGAATCAGAACGCCAGGTTGATTGTCCGAGTAGGTAGTGAATGTTTGG 56500
Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680
| || || || || || || |||| | || | | |||||| | || |||||
Sbjct 56501 GTTTGCTTCGTCGGTATCGTGGTATTTCGCTTGATCAGAACGGTCATTACTCCTCCAGCC 56560
Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740
||||| | || | || || || |||||||| | | | | || || | ||
Sbjct 56561 GTTTCGATTCCTAATGACAGTGGCGTGACATCCAACAAAAGTAAATCCTGGACCGCCTCC 56620
Query 281741 TCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATC 281799
||| | ||| ||||| | || ||||| | |||||||| ||||| |||||||||||
Sbjct 56621 GAAGTATCACCTTGCAAGATT-GCCGCTTGTACTGCAGCACCGTATGCGACAGCTTCATC 56679
Query 281800 AGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-TA 281858
|| || | | || ||| | || || |||||||| |||| ||||||| ||| ||
Sbjct 56680 GGGGTTGATGGATTTATTCAATTCCTTCCCATTGAAGAAATCCTGCAGAAGTT-TCTGTA 56738
Query 281859 CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCA 281918
|||| ||||| |||| ||| || ||||| || || || || || | | ||||||||
Sbjct 56739 CCTTCGGAATCCGAGTTGAACCACCAACCAAAACTATGTCGTGTATATTACCTTTATCCA 56798
Query 281919 GTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAAC 281978
|| | ||| || |||| | || ||||| | | | ||||| ||||||
Sbjct 56799 TCTTGGCGTCCCGTAGGGCTTTAGCCACTGGTTCCATCGTGTCACGGAACAAATCTGAAT 56858
Query 281979 AAAGTTCTTCGAATTTAGCTCTAGTAA---GAGTGACATTATAATCAATTCCTTCGAACA 282035
|||||||| || ||||| || | |||| | ||||||| |||||||| |
Sbjct 56859 TGAGTTCTTCAAAACGGGCTCTCGTCATCGAAGTG---TAGAAATCAATCCCTTCGAAAA 56915
Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095
||||| | |||||| | | || || || | || | | || || ||||||||||
Sbjct 56916 GCGAATCGATTTCAATGCTTGCCTGGGTTGATGCTGACAAAGTGCGCTTCGCACGTTCAC 56975
Query 282096 ATGCTGTCCTTAGTCTTCGTAAGGCT--TTTGCTGATTGATTCAAATCTGTTTTATATTT 282153
| || || | || | || || ||| |||| || |||| | || | |||| ||
Sbjct 56976 AAGCCGTACGCAGACGACGCAATGCTCGTTTGTTGGTTGA--GATGTCCTTCTTATTCTT 57033
Query 282154 TCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAA 282213
| || || ||||| ||| | || || | || ||||| |||||||| ||||| |
Sbjct 57034 ACGTTTAAACTCTTCCACAAAATGTGAGACCATTCGGTTATCGAAATCTTCTCCTCCTAG 57093
Query 282214 TTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGT 282273
| |||| |||| || | | || | |||| || || |||| || | | ||
Sbjct 57094 ATGTGTATCGCCTGCTGTGGACTTGACCTCAAAAATACCGTCCTCAATAGTGAGGATAGA 57153
Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333
||| || ||| || || || | |||||| ||||| ||||| || | |
Sbjct 57154 AACGTCGAAGGTACCGCCGCCAAGATCAAAGATAAGAACATTGCGCTCACCCACGCCTGT 57213
Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393
|||||| | || ||||||| || ||||| || ||||| || || || | | |||||
Sbjct 57214 TTTATCCAACCCGTACGCAATTGCGGCAGCTGTCGGTTCGTTGATGATACGTAGCACATT 57273
Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453
| ||||| ||| |||||||| || || ||||| | || ||||| ||||| || ||
Sbjct 57274 CAAGCCAGCTATTGCACCTGCATCCTTTGTTGCTTGACGCTGAGAATCATTAAAGTACGC 57333
Query 282454 AGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTT 282513
||| || || ||||| |||| || | | ||| |||| ||||| || |||| ||
Sbjct 57334 AGGTACTGTTATAACAGCATTTGCAATATTTTTCCCAAGGTAAGCTTCAGCAGTTTCCTT 57393
Query 282514 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGAT-TCATTTT 282572
||| ||| | | | ||| ||||| | || || || ||| | || || | || |
Sbjct 57394 CATCTTAATGAGCACCATCGATGAGACTTCCTCCGG-GAAAAATGATTTTTTCTCGCCCT 57452
Query 282573 GATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATT 282632
|||| |||| | | |||||| | | || | || |||| || ||||| | |
Sbjct 57453 TATATTCCACTTGCAGTTTCGGTTTACCAGCGTCACTTATTACTTCGAACGGCCAGTGCT 57512
Query 282633 TCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690
||||||| || || || | |||| ||| | | ||| || || ||||| |||||
Sbjct 57513 TCATATCACTCTGGACCGTTGGATCATCAAACTTACGACCGATCAACCGTTTCGCATC 57570
Score = 147 bits (162), Expect = 2e-29
Identities = 143/184 (78%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
||||||| ||||| ||||||| | ||| |||||| |||||||||||| ||||| ||
Sbjct 57645 CAAAAATGGTATTATTTGGATTCATTGCTACTTGATTTTTGGCTGCATCACCAATAAGCC 57704
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
| || || || ||||| | ||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct 57705 GCTCGGTATCGGTAAAAGCCACATAAGATGGTGTTGTCCGATTGCCTTGATCATTCGCAA 57764
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
|||| ||||| || |||| || | || |||||||| | | || || || |||||||
Sbjct 57765 TAATATCAACCTTTCCATGCTGGAACACTCCTACACACGAATACGTCGTCCCCAAATCAA 57824
Query 282870 TACC 282873
| ||
Sbjct 57825 TGCC 57828
>seq1457
Length=10361
Score = 161 bits (178), Expect = 7e-34
Identities = 902/1429 (63%), Gaps = 25/1429 (2%)
Strand=Plus/Plus
Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491
|| || || || || |||||||||| ||| ||||| || || || || || || || | |
Sbjct 8496 ACGTTCAGGATTCCGTTGGCATCCAGATCGAATGTCACCTCGATCTGCGGTACACCACGC 8555
Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551
| || || || || || | | || |||||| ||| || || || || |
Sbjct 8556 GGTGCCGGAGGAATACCCGAGAGGTCGAACTGGCCCAGAAGATTGTTGTCCTTGGTCATG 8615
Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611
|||||| |||||||| | ||||| | |||| | | || || || | || || |
Sbjct 8616 GCTCGTTCTCCCTCGAACACCTGGATCGAAACTCCTGGCTGGTTGTCGGCGTATGTCGAG 8675
Query 281612 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 281671
|| | | | | ||| |||||||| | ||||| ||||| | || ||||| |
Sbjct 8676 AAGATCTTCGTCTGTTTGCAAGGAATGCGCGAGTTTCGTTCAATCAGCTTCGTCATCACT 8735
Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731
|| || || || || | ||||| || | |||| |||||| || || | | | |||
Sbjct 8736 CCTCCGGCCGTCTCGATTCCAAGCGATAATGGAGCGACATCCACCAGCAGCACGTCCTGA 8795
Query 281732 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791
| || ||||| | | || ||| || || || || | |||||||| ||||| ||
Sbjct 8796 ATCTTGTCATCCTTGTCGCCGCTAAGGATGGCCGCCTGCACCGCAGCACCGTATGCCACT 8855
Query 281792 GCTTCATCAGGATTAAC----AGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAA 281846
||||| || ||||||| || |||| | ||| ||| ||| || || || ||
Sbjct 8856 GCTTCGTCCGGATTAATCGAAAGGTTCAACGATTTT----CCAGCGAAGAAGTTCTGCAA 8911
Query 281847 GAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACC 281905
| | || || || || ||||||| ||| ||||| || | || || || || |
Sbjct 8912 CAGC--GACTGCACTTTGGGTATACGAGTTGAGCCTCCTACCAGGACGATATCGTGAATG 8969
Query 281906 TGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCT 281964
| | | ||||||| || | ||| ||| | | || || || |||| | | |
Sbjct 8970 -GAGCTCTTATCCATCTTCGCATCGGATAGAGCCTTCTCCACCGGTTGCAACGTGGAACG 9028
Query 281965 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 282024
|||| || || || || || |||||| |||| | | | | ||||| ||
Sbjct 9029 GAACAGATCCGAGCACAGCTCCTCGAATCGTGCTCGGCTGATCTTCGTGTAGTAATCGAT 9088
Query 282025 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 282084
|| || | || | |||| || ||||| | || || || || | || |||||
Sbjct 9089 GCCATCCATCAGGGCGTCAATCTCGATCGTTGCTTCCGTGCTCGAGGACAATGTGCGTTT 9148
Query 282085 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT--CAAATCT 282142
|| | || ||||| || || | | ||| | ||| ||| ||| | || |||
Sbjct 9149 GGCCCTCTCGCATGCCGTTCTCAAACGTCGCAGAGCTCGTGC--ATTCTTCGACAGATCC 9206
Query 282143 GTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCT 282202
| || ||||| | ||||| || || ||| | | || | || || ||||| |||
Sbjct 9207 TTCTTGTATTTCCGTTTGAATTCCTCGACAAAGTGAGCCACGATCCGGTTGTCAAAGTCT 9266
Query 282203 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT---CCATCTTCA 282259
|| ||||| | | ||| | ||| | || || | || | || ||| || || ||
Sbjct 9267 TCGCCTCCTAGATGAGTGTCTCCGGCAGTGGCACGCACCTCAAACAGTGATCCCTCGTCG 9326
Query 282260 AGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 282319
| | || || | || || ||| || ||||||| ||| || || ||||| || |
Sbjct 9327 ATCGTCAGAATGGATACGTCGAAGGTACCGCCACCCAAATCGAAGATCAGTACGTTGCGT 9386
Query 282320 TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 282379
||| | |||| ||||| | || ||||| | ||| ||||| |||||||| || |||
Sbjct 9387 TCTCCCTTCAGGTTCTTATCCAAGCCGTACGCCAGAGCTGCAGCCGTTGGTTCGTTGATA 9446
Query 282380 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 282439
|| | || ||||| | |||||| || ||| ||||| || ||||| |||| |||
Sbjct 9447 ATGCGCATCACATTCAAACCAGCGATGGCTCCAGCATCCTTTGTGGCCTGTCGTTGACTG 9506
Query 282440 TCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCG 282499
||||| || || || || || || || || || | | ||| | || | || ||
Sbjct 9507 TCGTTGAAGTAGGCTGGCACCGTGATGACTGCGTTCTTCACTGACTGACCTAAGTAGGCT 9566
Query 282500 CTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGC 282559
|| |||| |||||| || | || | ||| || |||| || |||| | |
Sbjct 9567 TCGGCGGTTTCTTTCATCTTCGTCAACACCATCGAACTGATTTCCTCCGGAGCAAAGGTT 9626
Query 282560 TTGGATTCATT-TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTT 282618
||| || |||| | || | | ||||| | | | || | || |
Sbjct 9627 TTGCGCTCGCCCTTGAACTCG-ACGCGGATCTTGGGTTTGCCGCAATCGTTCACCACCGT 9685
Query 282619 AAATGGCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTA 282677
|||||||| | ||||||||| | |||| ||| || |||| || | | ||||| |
Sbjct 9686 GAATGGCCAGTGTTTCATATCGGCCTGAAT-CTTCGGATCATCGAATTTGCGTCCAATCA 9744
Query 282678 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCAT 282737
| || || |||||||| | || ||||| ||||| | || | || | ||||||||||
Sbjct 9745 ACCGCTTGGCATCAAACACCGTGTTGGTCGGATTCATGGCCACCTGGTTCTTGGCTGCAT 9804
Query 282738 CTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 282797
|||| ||||| | || || || | |||| |||||| || || || ||||| || |
Sbjct 9805 CTCCGATCAGTCGCTCCGTGTCCGAGAATGCAACATAGCTCGGTGTCGTTCGATTGCCCT 9864
Query 282798 GATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846
| || || |||||||| || || || |||| || | ||||| || ||
Sbjct 9865 GGTCGTTTGCAATAATCTCCACCTTTCCATGCTGGAACACACCGACGCA 9913
>seq299
Length=69886
Score = 116 bits (128), Expect = 3e-20
Identities = 127/169 (75%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 637121 TTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGAT 637180
||||||| |||| |||||| || || || |||||||||||||| |||| || ||| | |
Sbjct 6011 TTATTGTTGATTTTTCTTCGCCCAACATCGCTAAAGAAATGCACGTTGGGCACTTACGGT 5952
Query 637181 CAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATC 637240
| || || || || || |||||||| | | | ||| | | |||||||||||| |
Sbjct 5951 CCACAATAATAGGAGATTCTATTTGCCGATTTCTTGAATTTTTGCGACACGATGTTTTGC 5892
Query 637241 GTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGC 637289
| || |||||| | |||||||||||||| || || |||||| | || ||
Sbjct 5891 GAATCAATCATATCGGTGATTGGGGAACACAGTTTGGTATGCTTATCGC 5843
>seq934
Length=88778
Score = 96.9 bits (106), Expect = 3e-14
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730
|| || || || || || || || || || ||||| || || | || | || | ||||
Sbjct 35722 CCGATCAACCGCTTGGCGTCGAAGATTGTGTTGGTCGGGTTCATGGCCACCTGGTTTTTG 35663
Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790
|| ||||| || |||||| | || || || || || | ||| || || || || |||||
Sbjct 35662 GCGGCATCGCCGATCAGACGCTCGGTGTCGGTGAAGGCAACGTAGGACGGGGTGGTGCGG 35603
Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850
|| || || || || |||||||||||||| || |||| || | || || || || ||
Sbjct 35602 TTGCCCTGGTCGTTGGCAATAATTTCAACCTTGCCATGCTGGAAAACTCCAACGCAGCTG 35543
Query 282851 AAAGTTGTTCCTAAATCAATACC 282873
| || || || | |||||||||
Sbjct 35542 TAGGTCGTACCCAGATCAATACC 35520
>seq1077
Length=68013
Score = 86.0 bits (94), Expect = 5e-11
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381
|||||||| | || || | |||||| || ||||| || || || ||||| ||||| |
Sbjct 39661 TTTGTCTTCACTCTTGTCCATACCATAAGCCAAAGCGGCCGCCGTCGGTTCGTTAATCAC 39720
Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441
| || || || ||||| || || ||| || || || ||||| || | || |||||
Sbjct 39721 ACGCAGCACGTTCAGACCGGCGATCTGTCCGGCGTCCTTCGTGGCCTGACGCTGCGAATC 39780
Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCAT 282473
|||||| ||||| || || || || |||||||
Sbjct 39781 GTTAAAGTATGCCGGTACCGTGATGACGGCAT 39812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740521407381720
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