Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq80 140 3e-28 >seq80 Length=276208 Score = 140 bits (154), Expect = 3e-28 Identities = 516/802 (64%), Gaps = 30/802 (4%) Strand=Plus/Minus Query 25995 TAATCCATTCATTTTTAAAAGCAATCTCTTCCAGGCATGCAACCTTCATACCTTGTTGCT 26054 |||| ||| |||| | || ||||| ||||| | || | | || | |||||| | Sbjct 110645 TAATGAATTTATTTCTGAATGCAATTTCTTCGATACAGCCTATTTTAAATCCTTGTCTTT 110586 Query 26055 TCTCTATTGCATGAACAAATTGAGATGCTTCCATAAGACTTTCATGTGTTCCTGTATCCA 26114 | || || | ||||||| || || || |||| ||| ||||||||||||| Sbjct 110585 TTTCAATAACGCTTACAAATTCTGAAGCATCATGAAGAGAGTCAAAAGTTCCTGTATCCA 110526 Query 26115 GCCAAGTGAAACCTCTTCCTAGTTTACAGACACGTAAAGTCTT---TTCTTTCCAGTACA 26171 |||| | | ||||| || |||| || | |||| | |||||| | || | Sbjct 110525 GCCATGCGGTTCCTCTGTTAAGA--ACAGCTACCTCAAGTTTACCATTCTTTAAA-TAAA 110469 Query 26172 TCTCATTTATATCCGTAATCTCTAACTCCCCTCTAGCAGAAGGTTTAACGCTCTTAGCTT 26231 | || ||||| ||||| || | || ||||| ||||||||||||| | | || || Sbjct 110468 CATTGTTGATATCGGTAATTTCCAGTTCACCTCTTGCAGAAGGTTTAATGTTTTTGGCAA 110409 Query 26232 TCTGTATAACAGAATTATCGTAAAAGTACAAGCCTGTGATTGCGTAGTTGCtttttggtg 26291 | | | ||| ||||| ||||| || | || | | ||||| || ||| || Sbjct 110408 TTTCGACTACATTGTTATCATAAAAATAAAGTCCGGGTACAGCGTAATTTGATTTAGGCT 110349 Query 26292 tttttggtttttCTTCAATACTCACCACTGTACCTTCAGAATCAAACTCAACAACACCAA 26351 || ||| |||||||||||| ||| || | || ||||| || ||||||||| Sbjct 110348 TTAATGGCTTTTCTTCAATAGAAACCGCTTTCAGATCTTTGTCAAATTCTACAACACCAT 110289 Query 26352 ATCTTTCAGGATCATTTACGTGATACCCAAAGATATTAGCTCCACC---ATTCTTTTCAA 26408 |||||||||||||| |||||||| |||| | | | ||||| | || ||| Sbjct 110288 ATCTTTCAGGATCAGCCACGTGATAGGCAAAAACAACACCTCCATCCGGGTTGGTTT--- 110232 Query 26409 TATGTTCTTTAGCAGAATCTAAAATGCTACCAAAACTCTGACCAAAGAATAAATTATCAC 26468 | || || |||| | | | | || ||| | ||| ||| |||||||| Sbjct 110231 --TATTTTTCAGCAAAGTTCCCA----TTTCAGAACCGT----AAAAAAT--ATTATCAC 110184 Query 26469 CTAGCACAAGTGCTACAGAATCTTCACCAATAAAGTTCTCACCAATAATAAACGCTTCTG 26528 | | ||| | ||| ||||||| || ||||| | || || | |||||| || | || Sbjct 110183 CCAACACCAATGCGGCAGAATCACTGCCGATAAACTGGTCGCCCAAAATAAAAGCCTGTG 110124 Query 26529 CTAAACCTTTTGGGCTATCCTGTATTGCATACTGTAGGGAAATACCAAAAGAAGAACCAT 26588 |||| || | ||||| ||||| | || | || | || | |||||||| Sbjct 110123 CTAAGCCATCAGGGCTTGGCTGTACAACGTATTCTATATTACACCCGATTTGAGAACCAT 110064 Query 26589 CACCTAGAAGATTTACAAAATTAATTTGATCTTCTGGTGTTGTAATTATTAGTATTTCCC 26648 | || ||||| || | ||| |||||| | || || || || || || || ||| Sbjct 110063 CGCCCAGAAGTTTAATAAAGCCTTCTTGATCATGCGGGGTAGTGATGATCAGAATATCCT 110004 Query 26649 TAATTCCAG---AAAGCATTAGGACAGAGAGTGGATAATAAATCATAGGTTTATCGTAAA 26705 | ||||| | |||| | | | || || |||||||| ||||||||||| || |||| Sbjct 110003 TGATTCCCGCTAAAAGTAATGTG---GAAAGCGGATAATAGATCATAGGTTTGTCATAAA 109947 Query 26706 TTGGTAATAGTTGTTTACTAACCCCTTTAGTAACTGGGTAAAGCCTTGTTCCACTACCAC 26765 || | ||| || || || || | | || | |||||||| |||||||| || | Sbjct 109946 CAGGCATTAGCTGCTTGCTTACTGCAATCGTTAGAGGGTAAAGTCTTGTTCCGGATCCTC 109887 Query 26766 CTGCTAAGATAATACCTTTCAT 26787 | ||||| || || |||||||| Sbjct 109886 CGGCTAATATTATTCCTTTCAT 109865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475417206806400