Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_023693.1
Length=148612
Score E
Sequences producing significant alignments: (Bits) Value
seq80 140 3e-28
>seq80
Length=276208
Score = 140 bits (154), Expect = 3e-28
Identities = 516/802 (64%), Gaps = 30/802 (4%)
Strand=Plus/Minus
Query 25995 TAATCCATTCATTTTTAAAAGCAATCTCTTCCAGGCATGCAACCTTCATACCTTGTTGCT 26054
|||| ||| |||| | || ||||| ||||| | || | | || | |||||| |
Sbjct 110645 TAATGAATTTATTTCTGAATGCAATTTCTTCGATACAGCCTATTTTAAATCCTTGTCTTT 110586
Query 26055 TCTCTATTGCATGAACAAATTGAGATGCTTCCATAAGACTTTCATGTGTTCCTGTATCCA 26114
| || || | ||||||| || || || |||| ||| |||||||||||||
Sbjct 110585 TTTCAATAACGCTTACAAATTCTGAAGCATCATGAAGAGAGTCAAAAGTTCCTGTATCCA 110526
Query 26115 GCCAAGTGAAACCTCTTCCTAGTTTACAGACACGTAAAGTCTT---TTCTTTCCAGTACA 26171
|||| | | ||||| || |||| || | |||| | |||||| | || |
Sbjct 110525 GCCATGCGGTTCCTCTGTTAAGA--ACAGCTACCTCAAGTTTACCATTCTTTAAA-TAAA 110469
Query 26172 TCTCATTTATATCCGTAATCTCTAACTCCCCTCTAGCAGAAGGTTTAACGCTCTTAGCTT 26231
| || ||||| ||||| || | || ||||| ||||||||||||| | | || ||
Sbjct 110468 CATTGTTGATATCGGTAATTTCCAGTTCACCTCTTGCAGAAGGTTTAATGTTTTTGGCAA 110409
Query 26232 TCTGTATAACAGAATTATCGTAAAAGTACAAGCCTGTGATTGCGTAGTTGCtttttggtg 26291
| | | ||| ||||| ||||| || | || | | ||||| || ||| ||
Sbjct 110408 TTTCGACTACATTGTTATCATAAAAATAAAGTCCGGGTACAGCGTAATTTGATTTAGGCT 110349
Query 26292 tttttggtttttCTTCAATACTCACCACTGTACCTTCAGAATCAAACTCAACAACACCAA 26351
|| ||| |||||||||||| ||| || | || ||||| || |||||||||
Sbjct 110348 TTAATGGCTTTTCTTCAATAGAAACCGCTTTCAGATCTTTGTCAAATTCTACAACACCAT 110289
Query 26352 ATCTTTCAGGATCATTTACGTGATACCCAAAGATATTAGCTCCACC---ATTCTTTTCAA 26408
|||||||||||||| |||||||| |||| | | | ||||| | || |||
Sbjct 110288 ATCTTTCAGGATCAGCCACGTGATAGGCAAAAACAACACCTCCATCCGGGTTGGTTT--- 110232
Query 26409 TATGTTCTTTAGCAGAATCTAAAATGCTACCAAAACTCTGACCAAAGAATAAATTATCAC 26468
| || || |||| | | | | || ||| | ||| ||| ||||||||
Sbjct 110231 --TATTTTTCAGCAAAGTTCCCA----TTTCAGAACCGT----AAAAAAT--ATTATCAC 110184
Query 26469 CTAGCACAAGTGCTACAGAATCTTCACCAATAAAGTTCTCACCAATAATAAACGCTTCTG 26528
| | ||| | ||| ||||||| || ||||| | || || | |||||| || | ||
Sbjct 110183 CCAACACCAATGCGGCAGAATCACTGCCGATAAACTGGTCGCCCAAAATAAAAGCCTGTG 110124
Query 26529 CTAAACCTTTTGGGCTATCCTGTATTGCATACTGTAGGGAAATACCAAAAGAAGAACCAT 26588
|||| || | ||||| ||||| | || | || | || | ||||||||
Sbjct 110123 CTAAGCCATCAGGGCTTGGCTGTACAACGTATTCTATATTACACCCGATTTGAGAACCAT 110064
Query 26589 CACCTAGAAGATTTACAAAATTAATTTGATCTTCTGGTGTTGTAATTATTAGTATTTCCC 26648
| || ||||| || | ||| |||||| | || || || || || || || |||
Sbjct 110063 CGCCCAGAAGTTTAATAAAGCCTTCTTGATCATGCGGGGTAGTGATGATCAGAATATCCT 110004
Query 26649 TAATTCCAG---AAAGCATTAGGACAGAGAGTGGATAATAAATCATAGGTTTATCGTAAA 26705
| ||||| | |||| | | | || || |||||||| ||||||||||| || ||||
Sbjct 110003 TGATTCCCGCTAAAAGTAATGTG---GAAAGCGGATAATAGATCATAGGTTTGTCATAAA 109947
Query 26706 TTGGTAATAGTTGTTTACTAACCCCTTTAGTAACTGGGTAAAGCCTTGTTCCACTACCAC 26765
|| | ||| || || || || | | || | |||||||| |||||||| || |
Sbjct 109946 CAGGCATTAGCTGCTTGCTTACTGCAATCGTTAGAGGGTAAAGTCTTGTTCCGGATCCTC 109887
Query 26766 CTGCTAAGATAATACCTTTCAT 26787
| ||||| || || ||||||||
Sbjct 109886 CGGCTAATATTATTCCTTTCAT 109865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475417206806400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |