Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq2134 120 1e-21 >seq2134 Length=57081 Score = 120 bits (132), Expect = 1e-21 Identities = 268/395 (68%), Gaps = 8/395 (2%) Strand=Plus/Plus Query 188792 CAGGTAAAACATTATTTGCTCAAAC-ATTGGCTGATATGTTACATGTACCTCTAGCTATC 188850 |||||||||| | || || |||| |||| || | ||| |||||||| | || Sbjct 28520 CAGGTAAAACCCTTTTGGCAAAAACGATTGCAAGAGAACTTA-ATGTACCTTTCTGCATT 28578 Query 188851 TCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTG 188910 ||||| ||| |||||||||||| |||||||| || |||||||| |||| |||| Sbjct 28579 GTGGATGCTACTATTTTAACAGAAGCAGGTTATGTGGGGGAAGATGTTGAAA--GTATCC 28636 Query 188911 CTTCGTTTAATCCAA--GCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTAT 188968 ||| || | | || ||||| || | ||| ||| ||| |||||||| | Sbjct 28637 TTTCCAGACTTCTGATGGTGGCGGATTATGACGTTGAAAAAGCCGAAAAAGGAATTGTCT 28696 Query 188969 ATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATG 189028 |||||||| | |||||||| || ||||||||||| | | | || ||| |||||| Sbjct 28697 TCATCGATGAGATTGATAAAATCGCCAGAAAATCAGATAACCCGAGTATCACCAGAGATG 28756 Query 189029 TATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAG 189088 | || || |||||||||||||| | || | || | | ||||| | | | || | Sbjct 28757 TTTCCGGAGAAGGAGTACAGCAGGGATTGCTGAAGCTATTGGAAGGAAGTATCGTAAATG 28816 Query 189089 TTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAAT-GCTTGAAATAGATACAACT 189147 |||| ||||| || || | ||||| || ||| |||||| | | || ||||| Sbjct 28817 TTCCGCCTCAGGGAGGAAGAAAACATCCGGACC-AGAAATATATCCAGGTAAATACACAG 28875 Query 189148 AATATCTTGTTTATTCTTGGTGGAGCGTTTGATGG 189182 || ||| | |||||| || ||||| ||||| || Sbjct 28876 AACATCCTTTTTATTGCAGGAGGAGCTTTTGACGG 28910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591865120098560