Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq610 161 2e-34
seq966 149 1e-30
seq122 143 5e-29
seq56 118 2e-21
>seq610
Length=159711
Score = 161 bits (178), Expect = 2e-34
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
|||||| || | || ||||| ||||| ||||| || || || || || ||| | | |||
Sbjct 159560 ACGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACC 159501
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || |||||||| ||||| || | || ||||||||||| || ||||||||
Sbjct 159500 ATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTT 159441
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| |||||||| || || || || ||||||||||| || || || |||| ||| ||
Sbjct 159440 ATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGAT 159381
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| ||||||| ||||| || || |||||||||
Sbjct 159380 GGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 159344
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | ||| || || | || ||||| ||||| ||||| || || || || ||
Sbjct 159343 CCTCCACGGAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAC 159284
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | ||| || || || || |||||||| ||||| || | || |||||||||||
Sbjct 159283 AGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGG 159224
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| |||||||| || || || || ||||||||||| || || ||
Sbjct 159223 ATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACC 159164
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||| || ||||| ||||||| ||||| || || ||||||||
Sbjct 159163 TCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 159117
>seq966
Length=353950
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | ||| || || | || ||||| ||||| ||||| || || || || ||
Sbjct 222 CCTCCACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGGAC 163
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | ||| || || || || |||||||| ||||| || | || |||||||||||
Sbjct 162 AGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGG 103
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| |||||||| || || || || ||||||||||| || || ||
Sbjct 102 ATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACC 43
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATC 82805
|||| ||| || ||||| ||||||| ||||| || || |||
Sbjct 42 TCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATC 1
Score = 143 bits (158), Expect = 5e-29
Identities = 162/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || |||| || ||||| ||||| || || || || || || || || | | |||
Sbjct 439 ACGGAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGACC 380
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || |||||||| ||||| || | || ||||||||||| || ||||||||
Sbjct 379 ATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCCTT 320
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| |||||||| || || || || ||||| ||||| || || || |||| || ||
Sbjct 319 ATCCTGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTGAT 260
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| ||||||| ||||| || || |||||||||
Sbjct 259 GGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 223
>seq122
Length=254344
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||| || || |||||||| || || || ||||| || ||||| || ||
Sbjct 68452 CCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGAC 68511
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | |||||||| || || || || || ||||| | | || |||||||| ||
Sbjct 68512 AGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 68571
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| || || || || || || ||||| ||| || ||
Sbjct 68572 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCCACC 68631
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||| ||||||||||| ||||||||||| || || ||||||||
Sbjct 68632 TCCAGAGTGATCGTCTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 68678
>seq56
Length=464437
Score = 118 bits (130), Expect = 2e-21
Identities = 218/317 (69%), Gaps = 2/317 (1%)
Strand=Plus/Plus
Query 198310 AACTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATAA 198369
|||| |||| |||| |||| || || ||| ||||| | | || | |||||| | |
Sbjct 139552 AACTGGAAACGGCGAAAACCCACGATGATCTGTGGAACTCGGCCCAGTTGCAGATGGTGA 139611
Query 198370 GAGAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGA 198429
||||| || ||||| | ||||| | ||||||||||| || ||||| || || ||||
Sbjct 139612 AGGAAGGCAAGATGCACGGGTTTTTGCGCATGTACTGGGCCAAGAAGATCCTCGAGTGGA 139671
Query 198430 CAAGAACACCGGAAGACGC-TTTGAGTTATAGTATCTATCTAAACAATAAGTACGAACTA 198488
| | | |||| ||||| || | ||| | |||||| || ||| || | | | |
Sbjct 139672 CTAAATCACCCGAAGAGGCGCTCGAG-ACTGCTATCTACCTCAACGATCGCTTCAACTTG 139730
Query 198489 GACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACATGAT 198548
|| || ||||| ||||||||||| ||||| |||||||| || || | ||||||
Sbjct 139731 GATGGGCGCGATCCGAACGGATACGTCGGTTGCATGTGGTCGATCGCTGGCATCCATGAT 139790
Query 198549 CGAGCGTGGAAAGAAAGACCTATATTTGGGAAGATAAGATATATGAATTATGAGGGTTCT 198608
| | |||||||| | || ||||| ||||| | || ||||||||||| || |
Sbjct 139791 CAGGGTTGGAAAGAGCGTGAGATTTTTGGCAAGATCCGCTACATGAATTATGAAGGCTGC 139850
Query 198609 AAGAAAAAATTTGATGT 198625
||| || || |||||
Sbjct 139851 AAGCGTAAGTTCGATGT 139867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981799273152580
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