Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq56 102 1e-16
>seq56
Length=464437
Score = 102 bits (112), Expect = 1e-16
Identities = 200/293 (68%), Gaps = 2/293 (1%)
Strand=Plus/Plus
Query 182993 AACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGA 183052
|||| |||| ||| |||| || || ||| ||||| | | || | |||||| |||
Sbjct 139552 AACTGGAAACGGCGAAAACCCACGATGATCTGTGGAACTCGGCCCAGTTGCAGATGGTGA 139611
Query 183053 GAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGA 183112
||||| || ||||| | ||||| || ||||||||||| || ||||| || || ||||
Sbjct 139612 AGGAAGGCAAGATGCACGGGTTTTTGCGCATGTACTGGGCCAAGAAGATCCTCGAGTGGA 139671
Query 183113 CAAGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTA 183171
| | | | || ||||| || | ||| | |||||| | ||| || | | | |
Sbjct 139672 CTAAATCACCCGAAGAGGCGCTCGAG-ACTGCTATCTACCTCAACGATCGCTTCAACTTG 139730
Query 183172 GACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT 183231
|| || ||||| ||||||||||| ||||| |||||||| || || | || |||
Sbjct 139731 GATGGGCGCGATCCGAACGGATACGTCGGTTGCATGTGGTCGATCGCTGGCATCCATGAT 139790
Query 183232 AGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284
| |||||||| | || ||||| ||||| | || |||||||||||
Sbjct 139791 CAGGGTTGGAAAGAGCGTGAGATTTTTGGCAAGATCCGCTACATGAATTATGA 139843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903386130339200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |