Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq56 102 1e-16 >seq56 Length=464437 Score = 102 bits (112), Expect = 1e-16 Identities = 200/293 (68%), Gaps = 2/293 (1%) Strand=Plus/Plus Query 182993 AACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGA 183052 |||| |||| ||| |||| || || ||| ||||| | | || | |||||| ||| Sbjct 139552 AACTGGAAACGGCGAAAACCCACGATGATCTGTGGAACTCGGCCCAGTTGCAGATGGTGA 139611 Query 183053 GAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGA 183112 ||||| || ||||| | ||||| || ||||||||||| || ||||| || || |||| Sbjct 139612 AGGAAGGCAAGATGCACGGGTTTTTGCGCATGTACTGGGCCAAGAAGATCCTCGAGTGGA 139671 Query 183113 CAAGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTA 183171 | | | | || ||||| || | ||| | |||||| | ||| || | | | | Sbjct 139672 CTAAATCACCCGAAGAGGCGCTCGAG-ACTGCTATCTACCTCAACGATCGCTTCAACTTG 139730 Query 183172 GACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT 183231 || || ||||| ||||||||||| ||||| |||||||| || || | || ||| Sbjct 139731 GATGGGCGCGATCCGAACGGATACGTCGGTTGCATGTGGTCGATCGCTGGCATCCATGAT 139790 Query 183232 AGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284 | |||||||| | || ||||| ||||| | || ||||||||||| Sbjct 139791 CAGGGTTGGAAAGAGCGTGAGATTTTTGGCAAGATCCGCTACATGAATTATGA 139843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903386130339200