Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1047 161 1e-34 seq673 127 2e-24 seq610 120 3e-22 seq14 118 1e-21 seq966 116 4e-21 seq111 114 1e-20 seq122 100 3e-16 >seq1047 Length=31309 Score = 161 bits (178), Expect = 1e-34 Identities = 1094/1741 (63%), Gaps = 52/1741 (3%) Strand=Plus/Plus Query 148046 ATTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATG--AGT 148103 ||| || ||||| ||||||||||| || || ||||| || ||||||| ||| ||| Sbjct 16864 ATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCCATTTTGATGCAAGT 16923 Query 148104 CGCTTTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCG 148163 || | ||||||||| |||| |||||||| ||| || | ||||| | Sbjct 16924 T--TTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGATGTGTTGCGGAATTTCC 16981 Query 148164 TCGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTAT 148223 || || || | ||||| || || | ||||| || |||||| || | Sbjct 16982 TCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCATTTCATCGTCCCAC 17041 Query 148224 AGGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCG 148283 || | | || | || || | | || || |||||||| || ||||||||||| | Sbjct 17042 AGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTGAAACTCGCCAGAA 17101 Query 148284 AGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAA 148343 || || | || || || || || | |||||||| || |||||||| || | Sbjct 17102 AGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGT 17161 Query 148344 ATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGA 148403 || ||||| |||| || || ||||| ||||| ||||| || ||||||| ||| | Sbjct 17162 ATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCA---CGCCA 17218 Query 148404 TTTTTTA---TTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTC 148460 | | | | | || | || || | ||||| ||||| | || || || | | Sbjct 17219 TGTGTCACAATATTTCTTTTAAGCTCAGCCCAATCCCACAATTCCGTAGGCTTCTTCTCC 17278 Query 148461 CACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGT 148520 |||||||||||||| || || || |||| | || || || || || || ||| || Sbjct 17279 CACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATATGATTCGTATGGA 17338 Query 148521 CCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCA 148580 || | | || |||| |||||||||||| || || || ||| ||||||| || || Sbjct 17339 CCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAAC 17398 Query 148581 ATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAAC 148640 ||||| || | |||| || || |||||||| || |||| | | || Sbjct 17399 ATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAA 17458 Query 148641 GCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGC 148700 || || || | ||| || || || | || || || ||||| || ||||| | Sbjct 17459 GCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATATTGGATCGCTTT 17518 Query 148701 GCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCAC 148759 || || || | ||||| | || |||||||| |||| |||||| | | | || Sbjct 17519 GC-TTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATT-CTTAGTAACAG 17576 Query 148760 CTTTG--TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATC-----TACGATGCATC 148812 |||| || ||| ||| | | ||||| || | ||| | | ||| Sbjct 17577 TTTTGGCTACTTC-CTTTAGCTTTGCGAAATCATATGTACGATCGGGTTTCACAAACAT- 17634 Query 148813 GGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTA 148872 ||| | ||| || ||||| || || ||||| || | ||||| | ||| |||| Sbjct 17635 -GTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCATCTTTTGAAGAGTATTCTA 17693 Query 148873 CGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGC 148932 | || |||| |||||| || || |||||| || | || | || || ||||| | Sbjct 17694 CAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTAC 17753 Query 148933 TGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTA 148992 |||||||| || ||||| |||||||| || | |||||||| ||||| | ||| | | Sbjct 17754 GATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTCTATAA 17813 Query 148993 T---GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGT 149049 | ||||| || | || || || ||||| | | | |||||||| |||||| Sbjct 17814 TTGCGAACC-AT--AAATCTTGTGCCTTTACTTGACGGGTGAAACGACCCTCGCGCTCGT 17870 Query 149050 ATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGA--CCGGGGCACTT 149107 | ||| || || |||||| |||| || | || ||| | || || || | Sbjct 17871 AGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCA--TGTCTCCGACAATCCAGGACAGTC 17928 Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167 ||| |||||||| || ||||| ||| || | ||| |||| ||| |||| ||| || Sbjct 17929 GTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCCACACGCTGCATGAACAAATCAGG 17988 Query 149168 CACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCG 149227 | ||| |||||||| | | ||| | || | ||||| ||| |||| Sbjct 17989 AATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTTTT 18048 Query 149228 CAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287 || | | | |||| ||| | ||||| ||||| | || | || | || || Sbjct 18049 TAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGCAAAGGCTCC 18108 Query 149288 CTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344 |||||| || || ||||| || | || | | || || | || || | ||| Sbjct 18109 GGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGCGCAGCAT 18168 Query 149345 AGGTTCAATGCCACTGGCAGTGCCGTTAG-TAGAGCTA---ATGCGACTGCCGCGCGCTC 149400 ||| | | || | | | | || || | | || | ||| || ||| | Sbjct 18169 CGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCGCCCTAAT 18228 Query 149401 GCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCG 149459 ||| ||| || || | ||| ||||| || |||| | || ||||| || || | Sbjct 18229 GCA----GTGTACATTCAGGCCTATGCCACCAGCCG-ATTTAGAGATCAAGGCACACTGT 18283 Query 149460 CCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAG 149519 || || ||| || ||||||||||| ||| | ||| || ||||| ||||| || Sbjct 18284 TTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGGAC 18343 Query 149520 CACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATAT 149579 ||| |||||| | || | || || |||||||| || ||||| ||||| ||| Sbjct 18344 GACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTAT 18403 Query 149580 TTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCT 149639 || || || | ||||| ||||| | || || || || ||||| ||||| Sbjct 18404 CGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTATGCCG 18463 Query 149640 ATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCC---AATTTTG 149696 || || || ||||| ||||| || ||||| | || |||| | || || |||||| Sbjct 18464 ATAGCAACACGCATGAGCATGTGTTGCGGCCTCT---CCACAATCTTCCCCTTAATTTTT 18520 Query 149697 AGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCG 149756 | || || |||| | ||| ||| | |||||||| ||||| ||||||| ||| || Sbjct 18521 AACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACGGTCG 18580 Query 149757 T 149757 | Sbjct 18581 T 18581 >seq673 Length=25255 Score = 127 bits (140), Expect = 2e-24 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| ||||| ||||| || ||||| || | | | | ||| |||||| ||| Sbjct 24436 ATGCAGGGTCGACTCCTTCTGGATGTTGTAGTC--CGAAAGGGTACGGCCGTCCTCCAGC 24493 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || |||||||| || || ||||| || |||||||| |||| Sbjct 24494 TGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATC 24553 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | ||| | ||||| | ||||| || |||| |||| ||| |||||| Sbjct 24554 TTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATGGTCTTGCCG 24613 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||||||||| Sbjct 24614 GTGAGCGTTTTCACGAAAATCTGCAT 24639 >seq610 Length=159711 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| || || ||| | ||||| |||||||| || Sbjct 159313 GTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCA-TCCTCCAGCTGCTTTCC 159255 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||||||||||||||| || ||||| ||| Sbjct 159254 AGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTT 159195 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||| |||| ||||| || || | |||| ||| || || ||||| || Sbjct 159194 CACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGT 159135 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 159134 CTTCACGAAAATCTGCAT 159117 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| || || ||| | ||||| |||||||| || Sbjct 159541 GTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCA-TCCTCCAGCTGCTTTCC 159483 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||||||||||||||| || ||||| ||| Sbjct 159482 AGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTT 159423 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||| |||| ||||| || || | |||| ||| || || ||||| || Sbjct 159422 CACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGT 159363 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 159362 CTTCACGAAAATCTGCAT 159345 >seq14 Length=264275 Score = 118 bits (130), Expect = 1e-21 Identities = 175/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || || |||||||| || | || || |||||||| |||||||||||| |||||| Sbjct 132294 AGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTCGTTGGAGAACGTC 132353 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 || || ||||| | ||| | |||| | |||| ||||| ||||||||||| ||| Sbjct 132354 AGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTGCCACTGAAG 132413 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 || | ||||| ||| || || || || || |||||| | | | ||| ||||||| Sbjct 132414 AAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTAGTTAGCCTTCTTGCTC 132473 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCG 120879 |||||| ||||| ||||| || ||||| ||||||||||| | ||||| || Sbjct 132474 GAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACGCACGGCAGCGTCTCGATGGCA 132533 Query 120880 TTCAGCAG 120887 || | ||| Sbjct 132534 TTGAACAG 132541 >seq966 Length=353950 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || || ||||| ||| || ||| ||| | ||||| |||||||| || Sbjct 420 GTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGACCA-TCCTCCAGCTGCTTTCC 362 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||| ||||||||||| || ||||| ||| Sbjct 361 AGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGAATCTTAGCCTT 302 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| || |||| ||||| || || | ||||| ||| || || ||||| || Sbjct 301 CACGTTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTGATGGTCTTTCCTGTCAGGGT 242 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 241 CTTCACGAAAATCTGCAT 224 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| || || ||| | ||||| |||||||| || Sbjct 192 GTCGATTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCA-TCCTCCAGCTGCTTTCC 134 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||||||||||||||| || ||||| ||| Sbjct 133 AGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTT 74 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||| |||| ||||| || || | |||| ||| || || ||||| || Sbjct 73 CACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGT 14 Query 133643 TTTTACGAAAATC 133655 || ||||||||| Sbjct 13 CTTCACGAAAATC 1 >seq111 Length=461598 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || || ||||| |||||||| ||| || || ||| ||| || |||||||||| Sbjct 359682 GTCGATTCCTTCTGAATATTGTAGTCGGACAGAGT--ACGTCCGTCTTCCAGCTGCTTGC 359739 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || |||||||| || || || ||||| |||||||| |||||| || Sbjct 359740 CAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCT 359799 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||| || | |||||| || || | ||||| ||| || || || || | Sbjct 359800 TCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGG 359859 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 359860 TTTTGACGAAGATCTGCAT 359878 >seq122 Length=254344 Score = 100 bits (110), Expect = 3e-16 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| ||||| ||||| || || || ||| || || ||| ||| || | Sbjct 68473 AAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGACAGGGT--ACGTCCGTCTTCCA 68530 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| ||| | || | |||||||| || || || ||||| |||||||| || Sbjct 68531 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 68590 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | ||| | || || | |||||||| || | |||| || |||| Sbjct 68591 TCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGTCTTGC 68650 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| || || ||||| |||||||| Sbjct 68651 CAGTCAACGTCTTCACGAAGATCTGCAT 68678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483407385072800