Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1047 102 2e-16 >seq1047 Length=31309 Score = 102 bits (112), Expect = 2e-16 Identities = 408/636 (64%), Gaps = 15/636 (2%) Strand=Plus/Minus Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACT-AATGGAGGACAATTGGCTTCTTGCTT 110527 || ||| | || ||| | ||| |||| |||| || || | ||| || | || ||||| Sbjct 18393 CACGCTTCGCCAACCATGTTTGCTGCAGCAACTCAACGGCCG-CAACTGTCGTCCTGCTT 18335 Query 110528 TCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGC 110587 || || ||| || ||| || || || ||||| ||| |||||||| | ||| Sbjct 18334 CCTGCTCACAATGTCGGACGATAGCATCGAGGGAATTTACGATACTCTTAAACAGTGTGC 18275 Query 110588 TCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGG 110647 | || |||||| |||| || || || | | || || ||| | | ||||| Sbjct 18274 CTTGATCTCTAAATCGGCTGGTGGCATAGGCCTGAATGTACACTGCATTAGGGCGAAAGG 18215 Query 110648 AGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTT 110707 | || |||| ||| | |||| ||| ||| | || | || || ||| | | |||| Sbjct 18214 AACATATATTGCAGGAACGAATGGTATTTCGAACGGTTTAGTACCGATGCTGCGCGTCTA 18155 Query 110708 CAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTAT 110764 ||| | |||||| ||||| | ||||| ||||| | || || | |||||||| Sbjct 18154 CAATAATACTGCACGTTATGTTGACCAAGGAGGTAACAAGCGACCCGGAGCCTTTGCTAT 18095 Query 110765 CTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAA-- 110822 |||||| || || |||||| ||| ||||||| || || || | |||||| || Sbjct 18094 CTATCTGGAGCCATGGCATGGGGATGTATTTGAGTTTTTGGATC----TAAAAAAGAACA 18039 Query 110823 --GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTAT 110880 || ||||| | ||| | || | || || || |||||||| | ||||| | Sbjct 18038 CTGGCAAAGAAGAGGTCCGCGCAAGGGACATGTTCTACGCGCTGTGGATTCCTGATTTGT 17979 Query 110881 TCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTG 110940 ||||| | ||||| ||| || | |||||| ||| ||||| ||||| | ||||| Sbjct 17978 TCATGCAGCGTGTGGAAGCCAACGAAATGTGGAGTCTAATGTGCCCTCACGACTGTCCTG 17919 Query 110941 GTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAG 111000 | | || || || || | ||||| ||| | || ||| || || | || Sbjct 17918 GATTGTCGGAGACATGGGGTGAGGAGTTCGAAAAACTCTACACTGGCTACGAGCGCG-AG 17860 Query 111001 GCAAGTTTC-GCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAA 111059 | ||||| | ||| | || ||||| | |||||| ||| | |||||||| Sbjct 17859 GGTCGTTTCACCCGTCAAGTAAAGGCACAAGATTTATGGTTCGCAATTATAGAATCACAG 17800 Query 111060 GTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT 111095 |||||||||||| ||||| || | || |||||| Sbjct 17799 GTTGAAACTGGAGTGCCTTACATGCTTTACAAAGAT 17764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186779042593420