Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 102 2e-16
>seq1047
Length=31309
Score = 102 bits (112), Expect = 2e-16
Identities = 408/636 (64%), Gaps = 15/636 (2%)
Strand=Plus/Minus
Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACT-AATGGAGGACAATTGGCTTCTTGCTT 110527
|| ||| | || ||| | ||| |||| |||| || || | ||| || | || |||||
Sbjct 18393 CACGCTTCGCCAACCATGTTTGCTGCAGCAACTCAACGGCCG-CAACTGTCGTCCTGCTT 18335
Query 110528 TCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGC 110587
|| || ||| || ||| || || || ||||| ||| |||||||| | |||
Sbjct 18334 CCTGCTCACAATGTCGGACGATAGCATCGAGGGAATTTACGATACTCTTAAACAGTGTGC 18275
Query 110588 TCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGG 110647
| || |||||| |||| || || || | | || || ||| | | |||||
Sbjct 18274 CTTGATCTCTAAATCGGCTGGTGGCATAGGCCTGAATGTACACTGCATTAGGGCGAAAGG 18215
Query 110648 AGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTT 110707
| || |||| ||| | |||| ||| ||| | || | || || ||| | | ||||
Sbjct 18214 AACATATATTGCAGGAACGAATGGTATTTCGAACGGTTTAGTACCGATGCTGCGCGTCTA 18155
Query 110708 CAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTAT 110764
||| | |||||| ||||| | ||||| ||||| | || || | ||||||||
Sbjct 18154 CAATAATACTGCACGTTATGTTGACCAAGGAGGTAACAAGCGACCCGGAGCCTTTGCTAT 18095
Query 110765 CTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAA-- 110822
|||||| || || |||||| ||| ||||||| || || || | |||||| ||
Sbjct 18094 CTATCTGGAGCCATGGCATGGGGATGTATTTGAGTTTTTGGATC----TAAAAAAGAACA 18039
Query 110823 --GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTAT 110880
|| ||||| | ||| | || | || || || |||||||| | ||||| |
Sbjct 18038 CTGGCAAAGAAGAGGTCCGCGCAAGGGACATGTTCTACGCGCTGTGGATTCCTGATTTGT 17979
Query 110881 TCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTG 110940
||||| | ||||| ||| || | |||||| ||| ||||| ||||| | |||||
Sbjct 17978 TCATGCAGCGTGTGGAAGCCAACGAAATGTGGAGTCTAATGTGCCCTCACGACTGTCCTG 17919
Query 110941 GTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAG 111000
| | || || || || | ||||| ||| | || ||| || || | ||
Sbjct 17918 GATTGTCGGAGACATGGGGTGAGGAGTTCGAAAAACTCTACACTGGCTACGAGCGCG-AG 17860
Query 111001 GCAAGTTTC-GCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAA 111059
| ||||| | ||| | || ||||| | |||||| ||| | ||||||||
Sbjct 17859 GGTCGTTTCACCCGTCAAGTAAAGGCACAAGATTTATGGTTCGCAATTATAGAATCACAG 17800
Query 111060 GTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT 111095
|||||||||||| ||||| || | || ||||||
Sbjct 17799 GTTGAAACTGGAGTGCCTTACATGCTTTACAAAGAT 17764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186779042593420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |