Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq610 96.9 8e-15 seq966 89.7 1e-12 seq111 87.8 4e-12 seq673 84.2 5e-11 seq122 84.2 5e-11 >seq610 Length=159711 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || |||||||| || |||||| |||| || || || || || | || Sbjct 159360 AAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATACGATTGAGAAC 159419 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||| || || || || | ||||||||| Sbjct 159420 GTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGTCTTATCTTC 159479 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||| ||||| | ||| || |||| |||||| ||||||| || || Sbjct 159480 GCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAATCG 159539 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || || || || | ||||| Sbjct 159540 ACTCTCCATCTGGTACTGCGTCTTCG 159565 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || |||||||| || |||||| |||| || || || || || | || Sbjct 159132 AAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATACGATTGAGAAC 159191 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||| || || || || | ||||||||| Sbjct 159192 GTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGTCTTATCTTC 159251 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||| ||||| | ||| || |||| |||||| ||||||| || || Sbjct 159252 GCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAATCG 159311 Query 206365 ACTCTTCACCTTGT 206378 ||||| || || || Sbjct 159312 ACTCTCCATCTGGT 159325 >seq966 Length=353950 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || |||||||| || |||||| |||| || || || || || | || Sbjct 11 AAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATACGATTGAGAAC 70 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||| || || || || | ||||||||| Sbjct 71 GTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGTCTTATCTTC 130 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||| ||||| | ||| || |||| |||||| | ||||| || || Sbjct 131 GCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCAGAAGGAATCG 190 Query 206365 ACTCTTCACCTTGT 206378 ||||| || || || Sbjct 191 ACTCTCCATCTGGT 204 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || |||||||| || ||||| |||| || || || || ||| | || Sbjct 239 AAGACCCTGACAGGAAAGACCATCACCCTGGAGGTCGAGCCATCCGATACAATTGAGAAC 298 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||| ||| || || || | ||||||||| Sbjct 299 GTGAAGGCTAAGATTCAGGATAAGGAAGGCATTCCTCCAGATCAGCAGCGTCTTATCTTC 358 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||| ||||| | || || |||| |||||| |||| || || || Sbjct 359 GCTGGAAAGCAGCTGGAGGATGGTCGTACGCTGTCCGACTACAACATCCAAAAGGAATCG 418 Query 206365 ACTCTTCACCTTGT 206378 ||||| || || || Sbjct 419 ACTCTCCATCTAGT 432 >seq111 Length=461598 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| || || || ||||| | || || || || || Sbjct 359875 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCGGAT 359816 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| |||||| || Sbjct 359815 ACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCAGCAG 359756 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| ||||||| ||| | ||| || |||| ||||| | Sbjct 359755 CGTCTTATCTTCGCTGGCAAGCAGCTGGAAGACGGACGTACTCTGTCCGACTACAATATT 359696 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || ||||| || || Sbjct 359695 CAGAAGGAATCGACGCTTCATCTGGT 359670 >seq673 Length=25255 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||||||||| || || || ||||| | || || || || ||||| |||| Sbjct 24624 AAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCATCGGACACCATCGAGAAT 24565 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || ||||| || || || | || |||||| Sbjct 24564 GTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAGCAGCGTCTGATCTTC 24505 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||| || || | || | | || |||||| ||||||| ||||| Sbjct 24504 GCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCG 24445 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || ||||| || ||||||| Sbjct 24444 ACCCTGCATCTTGTGCTGCGACTTCG 24419 >seq122 Length=254344 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || || || ||||||||| |||| ||||| ||| || || |||| Sbjct 68663 AAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCGGATACCATCGAGAAC 68604 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || || | | |||||| Sbjct 68603 GTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAGCGTTTGATCTTC 68544 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| ||||||| ||| | || || |||| || ||| ||||||| ||||| Sbjct 68543 GCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAACATCCAGAAGGAGTCG 68484 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 68483 ACCCTGCAC 68475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181787184584620