Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 145 7e-30
seq966 107 2e-18
seq610 104 2e-17
seq14 100 3e-16
>seq1047
Length=31309
Score = 145 bits (160), Expect = 7e-30
Identities = 691/1074 (64%), Gaps = 47/1074 (4%)
Strand=Plus/Plus
Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATT 146633
|| ||||| || || ||||||||||| || ||||| ||||| |||| ||| ||
Sbjct 16760 GCTGGTTTGGTACGTAAATAATACATCCCGGTTTTAAGGCC-CATCTTCCAGCCGTAGAA 16818
Query 146634 GTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCT 146693
||||| || || | | |||| | ||||| || ||| || ||| || || ||
Sbjct 16819 ATGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGA 16878
Query 146694 TTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGC--GTTTTGTCTTCATT 146751
||| || ||||| || |||||||||||||| | | |||| ||||| | | |
Sbjct 16879 TTGGTCAATGAATGCTCCTCGGTCGGCCGCCATTT---TGATGCAAGTTTTCACAGAAAT 16935
Query 146752 -TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCT---GGAATACCTTCAATGTTTTG 146807
||||| | ||||||||||| || | | | | ||||| | || || |||||
Sbjct 16936 CTCCCAGACCGTTTTGTACAGA---TTGCGGATGTGTTGCGGAATTTCCTCTATCTTTTG 16992
Query 146808 AATAGAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAAAGGTTT-AGTT 146866
|| ||||| || || || | ||| |||| ||||| ||| | ||| | ||
Sbjct 16993 TATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCATTTCAT-CGTCCCACAGTTCCAATT 17051
Query 146867 TAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCAC---AC 146923
| | || || | | |||| ||||| || |||||||||||||| | || || ||
Sbjct 17052 CAGTTAGATCTTTTAGCAAATGATGATTCACTACTTGAAACTCGCCAGAAAGTACCCTAC 17111
Query 146924 GTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGG 146983
| || || ||||| |||| | || |||||||| || || || || | |||||| |
Sbjct 17112 GATTG---TAGACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGTATTTGCG 17168
Query 146984 CCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACG-CACGG 147042
| || | ||||| ||||| ||| | | || ||||| |||| || | | |||
Sbjct 17169 CAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCACGCCATGTGTCAC-A 17227
Query 147043 ATGTTGTCCTTCAAAGTTTG-CCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTC 147101
|| || || || || | | ||| ||||||| || ||| || | |||||||||
Sbjct 17228 ATATT-TCTTTTAAGCTCAGCCCAATCCCACAATTCCGTAGGCTTCTTCTCCCACATGTC 17286
Query 147102 GTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGC----GA-ACGTAGTGTAGCTTCCG 147156
|||||| || | |||| || | ||||| ||| | || |||| || | | |||
Sbjct 17287 GTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATATGATTCGTA-TGGACCATCCT 17345
Query 147157 TCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATT 147216
||| |||||||| ||||| || || || ||||| |||| |||||||| |||
Sbjct 17346 GTGCG----GCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATT 17401
Query 147217 TGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCA 147276
|||| || | | |||||||| || |||||||| |||| | | || |||
Sbjct 17402 TGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCA 17461
Query 147277 TCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCG 147336
|| |||| || || | |||| || || || || || ||| ||||| ||
Sbjct 17462 TCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATATTGGATCGCTTTGCT 17521
Query 147337 CTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACT-ACAACTTT 147395
|| | ||||| | || ||| || || ||||| || || | | | ||| |||
Sbjct 17522 TCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATT-CTTAGTAACAGTTTT 17580
Query 147396 AGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCC---CGTCTTCGACACGTACGCATTG 147452
| || | || || || |||||||||| || | || || || | |||
Sbjct 17581 GGCTACTTCCTTTAGCTTTGCGAAATCATATGTACGATCGGGTTTCAC----AAACAT-- 17634
Query 147453 GTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCAC 147512
||| | ||| || || ||||| || || || || | || || ||| | ||
Sbjct 17635 GTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCATCTTTTGAAGAGTATTCTAC 17694
Query 147513 GATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCG 147572
||||||| ||||||||| || || || ||| | ||||||||| || || || ||
Sbjct 17695 AATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACG 17754
Query 147573 ATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC 147626
||||||||| |||||| | |||||||| || | || || || || || | |||
Sbjct 17755 ATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTC 17808
>seq966
Length=353950
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || ||||| |||||||||||| || ||||| ||| || ||||| || || |
Sbjct 417 GATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGACCATCCTCCAGCTGCTTTCCAGCG 358
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| ||||||||||| |||||||| ||||| ||| || ||||
Sbjct 357 AAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGAATCTTAGCCTTCACG 298
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||||| ||||| || || | || | || || || ||||| || ||
Sbjct 297 TTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTC 238
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 237 ACGAAAATCTGCAT 224
Score = 98.7 bits (108), Expect = 9e-16
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || || ||||||||||||||| || ||||| ||| || ||||| || || |
Sbjct 189 GATTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCG 130
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| ||||||||||| |||||||| ||||| ||| || ||||
Sbjct 129 AAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACG 70
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||||| ||||| || || | || | || || || ||||| || ||
Sbjct 69 TTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTC 10
Query 132110 ATGAAAATC 132118
| |||||||
Sbjct 9 ACGAAAATC 1
>seq610
Length=159711
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| ||| | | || || || || |||||||||||| || ||||| |
Sbjct 159559 CGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCA 159500
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || ||||| || || | |||| |||||||| ||||||||||| |||||||| |||
Sbjct 159499 TCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTA 159440
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || |||| | || | ||||||| ||||| || || | || |
Sbjct 159439 TCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATG 159380
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || ||||| || || | ||||||||||||
Sbjct 159379 GTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 159345
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || || || |||||||||||| || ||||| ||| || ||||| || || |
Sbjct 159310 GATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCG 159251
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| ||||||||||| |||||||| ||||| ||| || ||||
Sbjct 159250 AAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACG 159191
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||||| ||||| || || | || | || || || ||||| || ||
Sbjct 159190 TTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTC 159131
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 159130 ACGAAAATCTGCAT 159117
>seq14
Length=264275
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46776 AAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATG 46835
||||| | ||||| ||||| |||||| |||| ||| || | | |||||| ||
Sbjct 132502 AAGGCGGACTGGGCGATGAACTGGATCTCGAGCAAGAAGGCTAACTACGGCGAGCGTATC 132443
Query 46836 GTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTAC 46895
||||| ||||| ||||| || | || || ||||| ||||| ||||| || |
Sbjct 132442 GTGGCGTTCGCAGCCGTCGAGGGTATCTTCTTCAGTGGCAGCTTTGCTGCCATCTTCTGG 132383
Query 46896 ATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGAC 46955
| || | ||| | |||||||| ||||||||| |||||| |||||||||||||
Sbjct 132382 CTAAAGAAGCGTGGCCTGATGCCGGGTCTGACGTTCTCCAACGAGCTGATCTCGCGCGAT 132323
Query 46956 GAAGGACTACACACGGACTTTGCGTGTCTC 46985
||||| |||| |||||||| ||||||
Sbjct 132322 GAAGGTTTACATTGCGACTTTGCCTGTCTC 132293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476597974039200
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