Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1066 143 3e-29 >seq1066 Length=67579 Score = 143 bits (158), Expect = 3e-29 Identities = 245/351 (70%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || || || || | ||||| || |||||||||||||| || |||||||| Sbjct 15951 CTTCAGTCCCGTTACATGCGCGATCATGTGCGTTAGCAGCGAGTAGCTCGCAATGTTGAA 16010 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || |||| || | || | || | ||||||| ||||||||| ||||| |||| Sbjct 16011 TGGCACGCCCAACCCTACATCGGCGGATCGTTGGTACATCTGGCACGACAGCTCACCGTT 16070 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 ||||||||||||||| || |||||| || || || ||||| ||| | |||| | Sbjct 16071 GGCCACGTAAAACTGTACCAAACAGTGGCAAGGTGGAAGAGCCATAATGGGAATGTCCAC 16130 Query 147162 GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGAT 147221 ||||||||||| | | | ||| | | ||| || |||| | || ||||| Sbjct 16131 CGGGTTCCAGGCGCTCAGGATGATCCGACGGTCGGTGGGATTGTTCTTCAGCTTGTCGAT 16190 Query 147222 AACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGT--TTGTCCCGCA-GTCCACGTA 147278 | | |||||| ||| |||| ||| ||| | | || ||| || | |||| Sbjct 16191 GATTTCCGCCAGCTGATCCTTACCCTTGCCTGTGTAATCATCGT--GGCATGTGC-CGTA 16247 Query 147279 CCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 | |||| |||||||| | ||||||||| || || |||||||||| ||| || Sbjct 16248 CGTGGCTCCAAAGTGACGCCACTGGAACCCATAAACTGGCCCCAAGTCACC 16298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583471808208000