Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq636 136 6e-26
seq14 114 2e-19
seq1672 109 8e-18
>seq636
Length=183128
Score = 136 bits (150), Expect = 6e-26
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||||| |||||||| ||||| |||| |||| ||| ||| |
Sbjct 2676 ATCTACAAGGTGCTGAAGCAGGTCCACCCGGATACCGG-----CATC-TCCTCGAAGGCG 2729
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| ||||||||| ||||| ||||| || |||| ||||||| | |||| ||
Sbjct 2730 ATGAGCATCATGAACAGCTTTGTGAACGATATCTTCGAGCGCATCGCCGCCGAAGCGTCC 2789
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||||| | || ||||||||| |||||| | ||||| ||||| ||||||||
Sbjct 2790 CGTCTGGCACACTACAACAAGCGTTCGACGATCACGTCTCGCGAAATCCAAACCGCCGTT 2849
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| ||| | ||| ||| || ||||||| |||||||||||||||||| ||
Sbjct 2850 CGTCTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCCGAGGGAAC 2899
>seq14
Length=264275
Score = 114 bits (126), Expect = 2e-19
Identities = 165/225 (73%), Gaps = 12/225 (5%)
Strand=Plus/Minus
Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC--- 1456152
|||||||| ||| |||||| |||| | ||||| |||||||||||||| ||||||
Sbjct 132532 GCCATCGAGACGCTGCCGTGCGTGAAGCGTAAGGCGGACTGGGCGATGAACTGGATCTCG 132473
Query 1456153 AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCA 1456211
| |||| ||| || ||| | |||||| |||| | || || | ||||||||| |
Sbjct 132472 AGCAAGAAGG--CT---AACTACGGCGAGCGTATCGTGGCGTTCGCAGCCGTCGAGGGTA 132418
Query 1456212 TCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270
|||| ||| ||||| || ||| |||||||| ||||| |||||||| ||||| |||||
Sbjct 132417 TCTTCTTCAGTGGCAGCTT-TGCTGCCATCTTCTGGCTAAAGAAGCGTGGCCTGATGCCG 132359
Query 1456271 GGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGTTTT 1456315
||||| | || |||||| | ||| ||||| |||| |||
Sbjct 132358 GGTCTGACG-TTCTCCAACGAGCTGATCTCGCGCGATGAAGGTTT 132315
Score = 111 bits (122), Expect = 2e-18
Identities = 186/265 (70%), Gaps = 3/265 (1%)
Strand=Plus/Minus
Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACT 1455855
||||||| || || || ||||| | ||| ||||| || ||| |||| | |||
Sbjct 132903 AGGCCGAAGCTTCTTTCTGGACGGTCGAAGAGGTGGATCTCTCAAAGGACATGAAAGACT 132844
Query 1455856 GGGTGTCGCTGAGCGACGAC-GAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGC 1455914
||| || |||| ||| || || ||||||||| |||||| |||||||| || |||
Sbjct 132843 GGGATTCACTGAAAC-CGAGTGAACGTCATTTCATCTCGCACGTGCTCGCCTTCTT-CGC 132786
Query 1455915 CGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATT 1455974
||| ||||| || ||| ||| || |||| | || || | | ||||| || |
Sbjct 132785 TGCCTCGGATGGTATTGTGAACGAAAATCTGGTTGAACGGTTCAGCCAGGAGGTACAGGT 132726
Query 1455975 GCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAAC 1456034
| | ||||| || | || || || ||||||||||| || |||||| | ||| ||||
Sbjct 132725 GACGGAGGCCCGCTGTTTCTATGGTTTCCAGATCGCGATGGAAAACGTACACAGCGAAAT 132666
Query 1456035 CTACTCGCTCCTGATCGACACCTAC 1456059
|||||||| || ||||||||||||
Sbjct 132665 GTACTCGCTTCTTATCGACACCTAC 132641
>seq1672
Length=328746
Score = 109 bits (120), Expect = 8e-18
Identities = 201/295 (68%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 332923 CGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAG 332982
||||||||||||||| || || |||||||| ||| | | ||||||| || || ||
Sbjct 203769 CGTGTTGCAGGCCAGCGCGAAGCGCGTCGTGTTGCTGTAAATTTCCATCGTACGCCTAAG 203828
Query 332983 GGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCG 333042
|||||| ||||| || || | || ||| ||||||||||| || | ||||||||| |
Sbjct 203829 GGCCTGCTGGGCACCCTCGGTCATGCTGTCCGCCTCGTCGAGAATCACGATCTTGTGTCT 203888
Query 333043 CCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTC 333102
|| ||||||| ||| | | | ||| ||||| | || ||||| || ||
Sbjct 203889 ACCACGCGGCAGTGTTACCTTCTGCTGGGCAAACATCTTGATTTTGTTTCGCACCACATC 203948
Query 333103 CACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAA 333162
| || || |||| ||| ||||| || ||||||||||| || | | | ||||
Sbjct 203949 GATACCCCGTTCGTTCGATGCGTTCAGCTCGAGCACGGCTTCACGGAAGTTGGGTCCCAG 204008
Query 333163 GAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCC 333217
|||| || || ||||| ||| |||| || || || ||||| ||||||
Sbjct 204009 CAGGATACGGGCAAGGCAGAGAATGGTCGTAGTTTTACCAACACCGGGAGGACCC 204063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177597076919640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |