Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq122 123 2e-23
seq111 122 8e-23
seq673 104 2e-17
seq966 96.9 3e-15
seq610 91.5 1e-13
seq56 84.2 2e-11
>seq122
Length=254344
Score = 123 bits (136), Expect = 2e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
||||||||||| | | | ||||| || | || |||||| || ||||| || |||
Sbjct 68449 TTTCCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCG 68508
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| || ||| || |||| ||||||||||| || || || ||||| |||||||| || |
Sbjct 68509 GACAGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGG 68568
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
|||| || |||||||||| |||||| ||| | | | | || || | |||
Sbjct 68569 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCC 68628
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739
||||||| |||||||| || || ||||| || ||||| || |||||||| ||
Sbjct 68629 ACCTCCAGAGTGATCGTCTTGCCAGTCAACGTCTTCACGAAGATCTGCATACT 68681
>seq111
Length=461598
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||||| ||| | ||| ||||| ||||| ||||| |||| |
Sbjct 359652 CCACCACGCAGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGAC 359711
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| ||||||||||| || || || || | |||||||| |||| |||
Sbjct 359712 AGAGTACGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGA 359771
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| |||||| ||||| | | | | ||| || | || |||
Sbjct 359772 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 359831
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || |||||||| | ||||| || || ||||||||
Sbjct 359832 TCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
>seq673
Length=25255
Score = 104 bits (114), Expect = 2e-17
Identities = 164/234 (70%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||| | ||| | || |||||| || |||||||| || |
Sbjct 24413 CCACCACGAAGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 24472
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| ||||||||||| || || || |||| |||||||| || | ||
Sbjct 24473 AGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 24532
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT---TCC 35686
| | |||||||||| |||||| ||||| | | | | ||||| |||| ||
Sbjct 24533 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTC---CGATGGCTCG 24589
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
||||| | ||||| || || || || | |||||||| || ||||||||| ||
Sbjct 24590 ACCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTTG 24643
>seq966
Length=353950
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|||||||| |||||||| |||| || || || | || ||||||||||| || || ||
Sbjct 414 TCCTTTTGGATGTTGTAGTCGGACAGCGTACGACCATCCTCCAGCTGCTTTCCAGCGAAG 355
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | |||||||| || | ||||| || ||||| ||| ||||| ||||| |
Sbjct 354 ATAAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTC 295
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || ||| | || ||||||| ||||| || || || |||| || |||||
Sbjct 294 TCAATTGTATCGGATGGCTCGACCTCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTCACG 235
Query 35726 AATATCTGCATTC 35738
|| ||||||||||
Sbjct 234 AAAATCTGCATTC 222
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/224 (68%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| ||||| | | | ||||| ||| | || ||||| ||||||||||| ||||
Sbjct 224 TTCCTCCACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGG 165
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| || || | || ||||||||||| || || || || | |||||||| || | ||
Sbjct 164 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 105
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
| | || ||||| ||| ||||| ||||| | | | ||| ||| | || |
Sbjct 104 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 45
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATC 35731
|||||| ||||| || || || |||| || ||||| || |||
Sbjct 44 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATC 1
>seq610
Length=159711
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| || || || | || ||||||||||| || || ||
Sbjct 159535 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAG 159476
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | |||||||| || | ||| | || ||||| ||| ||||| ||||| |
Sbjct 159475 ATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTC 159416
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||| ||| | || ||||||| ||||| || || || |||| || |||||
Sbjct 159415 TCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACG 159356
Query 35726 AATATCTGCATTC 35738
|| ||||||||||
Sbjct 159355 AAAATCTGCATTC 159343
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| ||||| | | | ||||| ||| | || ||||| || |||||||| ||||
Sbjct 159345 TTCCTCCACGGAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGG 159286
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| || || | || ||||||||||| || || || || | |||||||| || | ||
Sbjct 159285 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 159226
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
| | || ||||| ||| ||||| ||||| | | | ||| ||| | || |
Sbjct 159225 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 159166
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| ||||| || || || |||| || ||||| || ||||||||
Sbjct 159165 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 159117
>seq56
Length=464437
Score = 84.2 bits (92), Expect = 2e-11
Identities = 202/303 (67%), Gaps = 2/303 (1%)
Strand=Plus/Plus
Query 44118 ACCCATGATCCTTTGTGGAACGCTGCCCAAACACAACTGTTGCGAGAAGGTAAAATGCAC 44177
||||| ||| | |||||||| | ||||| || || || ||||| || ||||||
Sbjct 139569 ACCCACGATGATCTGTGGAACTCGGCCCAGTTGCAGATGGTGAAGGAAGGCAAGATGCAC 139628
Query 44178 CAATACATGCGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACC 44237
| |||| ||||| ||| ||||||||| | |||||| | || | ||
Sbjct 139629 GGGTTTTTGCGCATGTACTGGGCCAAGAAGATCCTCGAGTGGACTAAATCACCCGAAGAG 139688
Query 44238 GCGCTCGTTCATGCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAAC 44297
||||||| ||| ||||| || ||||| | || ||||| || ||||| || |||
Sbjct 139689 GCGCTCGAGACTGCTATCTACCTCAACGATCGCTTCAACTTGGATGGGCGCGATCCGAAC 139748
Query 44298 GGGTACGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGGCGTGGCGAGAGCT 44356
|| ||||| || || |||||||| || || |||| || ||||| ||| |||||
Sbjct 139749 GGATACGTCGGTTGCATGTGGTCGATCGCTGGCATCCATGATCAGGGT-TGGAAAGAGCG 139807
Query 44357 ACCCATCTACGGCAAAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTTGATGT 44416
|| | ||||| | ||||||||||| || | || ||| | ||||| |||||
Sbjct 139808 TGAGATTTTTGGCAAGATCCGCTACATGAATTATGAAGGCTGCAAGCGTAAGTTCGATGT 139867
Query 44417 AAA 44419
||
Sbjct 139868 CAA 139870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450781090477600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |