Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 140 3e-28
seq673 122 9e-23
seq610 114 1e-20
seq966 107 2e-18
seq111 105 7e-18
seq14 102 8e-17
seq122 100 3e-16
>seq1047
Length=31309
Score = 140 bits (154), Expect = 3e-28
Identities = 287/421 (68%), Gaps = 7/421 (2%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||||||||| |||| || || | ||||| || || ||||| ||||| | ||| |
Sbjct 18489 CAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGAAGATATTGATTCTGCCATC 18430
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| |||||| | || |||| | | | ||||||||||||||||| |||||||||||
Sbjct 18429 GAGACGTACAATTTGCTGTCAGAGCGATACTTTACGCACGCTTCGCCAACCATGTTTGCT 18370
Query 7684 GCGGGCAC-AAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742
|| | || |||| ||| ||| |||| || || || |||| || ||| || || ||
Sbjct 18369 GCAGCAACTCAACG-GCCGCAACTGTCGTCCTGCTTCCTGCTCACAATGTCGGACGATAG 18311
Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCG 7801
|||||| || |||||| | || || | || ||| || || |||| |||| || |
Sbjct 18310 CATCGAGGGAATTTACGATACTCTTAAACAGTGTGCCTTGATCTCTAAAT-CGGCTGGTG 18252
Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACG 7861
| ||||| ||||| ||| || | | | || || || | || | || || |
Sbjct 18251 GCATAGGCCTGAATGTACACTGCATTAGGGCGAAAGGAACATATATTGCAGGAACGAATG 18192
Query 7862 GAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAG 7921
| | | | |||||||| || ||| ||||||| | |||||| | | || |||| |
Sbjct 18191 GTATTTCGAACGGTTTAGTACCGATGCTGCGCGTCTACAATAATACTGCACGTTATGTTG 18132
Query 7922 ACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGG 7978
|||| || || ||||| || ||| ||| |||||| ||||||| ||||| | ||
Sbjct 18131 ACCAAGGAGGTAACAAGCGACCCGGAGCCTTTGCTATCTATCTGGAGCCATGGCATGGGG 18072
Query 7979 A 7979
|
Sbjct 18071 A 18071
Score = 122 bits (134), Expect = 9e-23
Identities = 288/431 (67%), Gaps = 12/431 (3%)
Strand=Plus/Minus
Query 8500 ATCATTGATGTCAATTTTTATCCCTT---GGAAGAAGCGCGCGTATCGAACATGCGCCAC 8556
||||| ||| | |||| |||||| | ||||| | ||| ||| || |||||||||
Sbjct 17553 ATCATCGATATAAATTATTATCCTGTTCCGGAAGCAAAGCG---ATCCAATATGCGCCAC 17497
Query 8557 AGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCC 8616
| || | || | || |||||||| |||| || || || | || |||||| |||
Sbjct 17496 CGTCCGATAGGGATCGGAGTGCAAGGCATGGCAGATGCTTTCATCTTGATGCGCCACCCT 17437
Query 8617 TACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGC 8676
|||||||| ||||||| | || | || | |||| ||||| | || | |||
Sbjct 17436 TACGAAAGTGAAGAAGCCCAGCTGTTGAATCAACAAATGTTTGAAACCATTTACTTCGGA 17377
Query 8677 GCATTAGAAGCCAGCTGTCAACTTGCCCG---AGAATTGGGCACGTACGAATCGTACGCG 8733
|| | ||||| ||||| || ||| ||| || || | || |||||||| || |
Sbjct 17376 GCCCTTGAAGCGAGCTGCGAA-TTGGCCGCACAGGATGGTCCA--TACGAATCATATGAT 17320
Query 8734 GGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCTCT 8793
|| || || | ||| ||||| | || |||||||||||| | | ||| ||
Sbjct 17319 GGAAGTCCAGTTAGCAAAGGAATCCTTCAGTACGACATGTGGGAGAAGAAGCCTACGGAA 17260
Query 8794 TTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTG 8853
|||||| ||||| || | ||| | || |||| | || |||||||||| |||
Sbjct 17259 TTGTGGGATTGGGCTGAGCTTAAAAGAAATATTGTGACACATGGCGTGCGCAATTCCCTG 17200
Query 8854 TTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTT 8913
| | || ||||| ||||| ||||||| |||||| | || ||||||||||| |||
Sbjct 17199 CTTTTAGCGCCTATGCCGACCGCGTCGACTGCGCAAATACTCGGTAACAACGAATCTTTT 17140
Query 8914 GAGCCGTTCAC 8924
|| || | |||
Sbjct 17139 GAACCATACAC 17129
>seq673
Length=25255
Score = 122 bits (134), Expect = 9e-23
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||||| ||| || || || || || ||||| || ||||||||||| || ||| |
Sbjct 24422 AGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGG 24481
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || ||||| ||||| || || |||| |||||||||||| || || || || ||
Sbjct 24482 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCC 24541
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || || | ||||| || | || || ||||| ||
Sbjct 24542 TTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTG 24601
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || ||||| | ||||| |||||||| |||||||||
Sbjct 24602 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTTG 24643
>seq610
Length=159711
Score = 114 bits (126), Expect = 1e-20
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||| | ||| || | ||| || || || || |||||||| || ||||||||||||
Sbjct 159345 TTCCTCCACGGAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGG 159286
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| || || || || ||||| || || || || || | |||||||||||| || |
Sbjct 159285 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 159226
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| |||||||| || || ||||| || || || || | || ||||| | || |
Sbjct 159225 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 159166
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
| || ||||| ||||| || || || | || || |||||||| ||||| |||
Sbjct 159165 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATATTG 159113
Score = 102 bits (112), Expect = 8e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || || || || || |||||||| || |||||||||||| | || ||
Sbjct 159562 AGACGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGA 159503
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || || || | |||||||||||| || || ||||||||
Sbjct 159502 CCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCC 159443
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || || | || ||||| | || || || |||||
Sbjct 159442 TTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTG 159383
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| || || || | || || |||||||| ||||||
Sbjct 159382 ATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 159344
>seq966
Length=353950
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| || || || || ||||||||||| |||||||||||| | || ||
Sbjct 441 AGACGGAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGA 382
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || || || | |||||||||||| || || ||||||||
Sbjct 381 CCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCC 322
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || || | ||| ||||| | || || || || ||
Sbjct 321 TTATCCTGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTG 262
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| || || || | || || |||||||| ||||||
Sbjct 261 ATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 223
Score = 105 bits (116), Expect = 7e-18
Identities = 157/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||| | || || | ||| || || || || |||||||| |||||||||||||||
Sbjct 224 TTCCTCCACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGG 165
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| || || || || ||||| || || || || || | |||||||||||| || |
Sbjct 164 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 105
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| |||||||| || || ||||| || || || || | || ||||| | || |
Sbjct 104 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 45
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT 134707
| || ||||| ||||| || || || | || || ||||||||
Sbjct 44 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAAT 2
>seq111
Length=461598
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| || || ||||| |||||||| ||||| ||||||||| | || |
Sbjct 359661 AGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGACAGAGTACGT 359720
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || ||||| ||||| || || || | |||||||||||| ||||| ||||| ||
Sbjct 359721 CCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCCCTCC 359780
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || || | || || || | || || || || ||
Sbjct 359781 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTG 359840
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| ||||| || | ||||| ||||| || |||||
Sbjct 359841 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
>seq14
Length=264275
Score = 102 bits (112), Expect = 8e-17
Identities = 233/350 (67%), Gaps = 17/350 (5%)
Strand=Plus/Plus
Query 21528 CAATTCCACGCACAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATT 21587
||| ||||| ||| ||||||||||||||| || ||||| || ||||| ||||||||
Sbjct 132113 CAACTCCACCAACAGACGATCCGCCACGAACTCGATGTACTGCGACATGAGCTCGCAATT 132172
Query 21588 CATGCCCAACAGATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGC 21647
||| ||||||| |||||| || || |||| || | ||||||| |||||| || ||
Sbjct 132173 CATACCCAACATATCGACAGGCAGTGCTTTCGTCAGGAACTCCTGCTCGATCATGACTGC 132232
Query 21648 TTCCTTGATCATGGCGTGTATTTCACCGGCGGACAATTTGTCTTGAGGCTCGATGTA--- 21704
|| ||| || | || ||| |||| | || | | ||||
Sbjct 132233 ATCACGGATGATATCCGTTA-------CGCG-----TTTG-CGCGATGGTTTCTGTACCA 132279
Query 21705 -TTTGTTGTAGTAGAGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATT 21763
| ||| | |||||| ||||| | | || || || || |||||||| |||| |
Sbjct 132280 GATACTTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCT 132339
Query 21764 CGTTGCTGAACGTGAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAA 21823
||||| |||||| ||||| ||||| | || || || || | | || || || ||||
Sbjct 132340 CGTTGGAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAA 132399
Query 21824 AGCTACCGGaaaaaaaCACGCCCTCCACAATGGCGAACGCCACCATGCGC 21873
|||| || || || | ||||| || ||||||||||| || |||
Sbjct 132400 AGCTGCCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGC 132449
>seq122
Length=254344
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
||||| || | || || | || | ||| || || || ||||| || ||||| ||||||
Sbjct 68449 TTTCCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCG 68508
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| ||| | ||| || ||||| ||||| || || ||||||||||||||||| ||
Sbjct 68509 GACAGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGG 68568
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| ||||| || || || || || || ||||| || | || || || | |||
Sbjct 68569 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCC 68628
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || || || || || || || || ||||| || |||||
Sbjct 68629 ACCTCCAGAGTGATCGTCTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 68678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505384375194400
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