Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1047 140 3e-28 seq673 122 9e-23 seq610 114 1e-20 seq966 107 2e-18 seq111 105 7e-18 seq14 102 8e-17 seq122 100 3e-16 >seq1047 Length=31309 Score = 140 bits (154), Expect = 3e-28 Identities = 287/421 (68%), Gaps = 7/421 (2%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 ||||||||||| |||| || || | ||||| || || ||||| ||||| | ||| | Sbjct 18489 CAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGAAGATATTGATTCTGCCATC 18430 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | || |||| | | | ||||||||||||||||| ||||||||||| Sbjct 18429 GAGACGTACAATTTGCTGTCAGAGCGATACTTTACGCACGCTTCGCCAACCATGTTTGCT 18370 Query 7684 GCGGGCAC-AAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 || | || |||| ||| ||| |||| || || || |||| || ||| || || || Sbjct 18369 GCAGCAACTCAACG-GCCGCAACTGTCGTCCTGCTTCCTGCTCACAATGTCGGACGATAG 18311 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGC-GGCG 7801 |||||| || |||||| | || || | || ||| || || |||| |||| || | Sbjct 18310 CATCGAGGGAATTTACGATACTCTTAAACAGTGTGCCTTGATCTCTAAAT-CGGCTGGTG 18252 Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACG 7861 | ||||| ||||| ||| || | | | || || || | || | || || | Sbjct 18251 GCATAGGCCTGAATGTACACTGCATTAGGGCGAAAGGAACATATATTGCAGGAACGAATG 18192 Query 7862 GAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAG 7921 | | | | |||||||| || ||| ||||||| | |||||| | | || |||| | Sbjct 18191 GTATTTCGAACGGTTTAGTACCGATGCTGCGCGTCTACAATAATACTGCACGTTATGTTG 18132 Query 7922 ACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGG 7978 |||| || || ||||| || ||| ||| |||||| ||||||| ||||| | || Sbjct 18131 ACCAAGGAGGTAACAAGCGACCCGGAGCCTTTGCTATCTATCTGGAGCCATGGCATGGGG 18072 Query 7979 A 7979 | Sbjct 18071 A 18071 Score = 122 bits (134), Expect = 9e-23 Identities = 288/431 (67%), Gaps = 12/431 (3%) Strand=Plus/Minus Query 8500 ATCATTGATGTCAATTTTTATCCCTT---GGAAGAAGCGCGCGTATCGAACATGCGCCAC 8556 ||||| ||| | |||| |||||| | ||||| | ||| ||| || ||||||||| Sbjct 17553 ATCATCGATATAAATTATTATCCTGTTCCGGAAGCAAAGCG---ATCCAATATGCGCCAC 17497 Query 8557 AGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCC 8616 | || | || | || |||||||| |||| || || || | || |||||| ||| Sbjct 17496 CGTCCGATAGGGATCGGAGTGCAAGGCATGGCAGATGCTTTCATCTTGATGCGCCACCCT 17437 Query 8617 TACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGC 8676 |||||||| ||||||| | || | || | |||| ||||| | || | ||| Sbjct 17436 TACGAAAGTGAAGAAGCCCAGCTGTTGAATCAACAAATGTTTGAAACCATTTACTTCGGA 17377 Query 8677 GCATTAGAAGCCAGCTGTCAACTTGCCCG---AGAATTGGGCACGTACGAATCGTACGCG 8733 || | ||||| ||||| || ||| ||| || || | || |||||||| || | Sbjct 17376 GCCCTTGAAGCGAGCTGCGAA-TTGGCCGCACAGGATGGTCCA--TACGAATCATATGAT 17320 Query 8734 GGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCTCT 8793 || || || | ||| ||||| | || |||||||||||| | | ||| || Sbjct 17319 GGAAGTCCAGTTAGCAAAGGAATCCTTCAGTACGACATGTGGGAGAAGAAGCCTACGGAA 17260 Query 8794 TTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTG 8853 |||||| ||||| || | ||| | || |||| | || |||||||||| ||| Sbjct 17259 TTGTGGGATTGGGCTGAGCTTAAAAGAAATATTGTGACACATGGCGTGCGCAATTCCCTG 17200 Query 8854 TTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTT 8913 | | || ||||| ||||| ||||||| |||||| | || ||||||||||| ||| Sbjct 17199 CTTTTAGCGCCTATGCCGACCGCGTCGACTGCGCAAATACTCGGTAACAACGAATCTTTT 17140 Query 8914 GAGCCGTTCAC 8924 || || | ||| Sbjct 17139 GAACCATACAC 17129 >seq673 Length=25255 Score = 122 bits (134), Expect = 9e-23 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 ||||||| ||| || || || || || ||||| || ||||||||||| || ||| | Sbjct 24422 AGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGG 24481 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| || || |||| |||||||||||| || || || || || Sbjct 24482 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCC 24541 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | ||||| || | || || ||||| || Sbjct 24542 TTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTG 24601 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || ||||| | ||||| |||||||| ||||||||| Sbjct 24602 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTTG 24643 >seq610 Length=159711 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | ||| || | ||| || || || || |||||||| || |||||||||||| Sbjct 159345 TTCCTCCACGGAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGG 159286 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || || || || ||||| || || || || || | |||||||||||| || | Sbjct 159285 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 159226 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || || ||||| || || || || | || ||||| | || | Sbjct 159225 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 159166 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 | || ||||| ||||| || || || | || || |||||||| ||||| ||| Sbjct 159165 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATATTG 159113 Score = 102 bits (112), Expect = 8e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || || || || || |||||||| || |||||||||||| | || || Sbjct 159562 AGACGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGA 159503 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || || | |||||||||||| || || |||||||| Sbjct 159502 CCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCC 159443 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || || || | || ||||| | || || || ||||| Sbjct 159442 TTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTG 159383 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || || || | || || |||||||| |||||| Sbjct 159382 ATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 159344 >seq966 Length=353950 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| || || || || ||||||||||| |||||||||||| | || || Sbjct 441 AGACGGAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGA 382 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || || | |||||||||||| || || |||||||| Sbjct 381 CCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCC 322 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || || || | ||| ||||| | || || || || || Sbjct 321 TTATCCTGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTG 262 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || || || | || || |||||||| |||||| Sbjct 261 ATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 223 Score = 105 bits (116), Expect = 7e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | ||| || || || || |||||||| ||||||||||||||| Sbjct 224 TTCCTCCACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGG 165 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || || || || ||||| || || || || || | |||||||||||| || | Sbjct 164 ACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAG 105 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || || ||||| || || || || | || ||||| | || | Sbjct 104 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGA 45 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT 134707 | || ||||| ||||| || || || | || || |||||||| Sbjct 44 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAAT 2 >seq111 Length=461598 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| || || ||||| |||||||| ||||| ||||||||| | || | Sbjct 359661 AGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGACAGAGTACGT 359720 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| || || || | |||||||||||| ||||| ||||| || Sbjct 359721 CCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCCCTCC 359780 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | || || || | || || || || || Sbjct 359781 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTG 359840 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || | ||||| ||||| || ||||| Sbjct 359841 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878 >seq14 Length=264275 Score = 102 bits (112), Expect = 8e-17 Identities = 233/350 (67%), Gaps = 17/350 (5%) Strand=Plus/Plus Query 21528 CAATTCCACGCACAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATT 21587 ||| ||||| ||| ||||||||||||||| || ||||| || ||||| |||||||| Sbjct 132113 CAACTCCACCAACAGACGATCCGCCACGAACTCGATGTACTGCGACATGAGCTCGCAATT 132172 Query 21588 CATGCCCAACAGATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGC 21647 ||| ||||||| |||||| || || |||| || | ||||||| |||||| || || Sbjct 132173 CATACCCAACATATCGACAGGCAGTGCTTTCGTCAGGAACTCCTGCTCGATCATGACTGC 132232 Query 21648 TTCCTTGATCATGGCGTGTATTTCACCGGCGGACAATTTGTCTTGAGGCTCGATGTA--- 21704 || ||| || | || ||| |||| | || | | |||| Sbjct 132233 ATCACGGATGATATCCGTTA-------CGCG-----TTTG-CGCGATGGTTTCTGTACCA 132279 Query 21705 -TTTGTTGTAGTAGAGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATT 21763 | ||| | |||||| ||||| | | || || || || |||||||| |||| | Sbjct 132280 GATACTTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCT 132339 Query 21764 CGTTGCTGAACGTGAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAA 21823 ||||| |||||| ||||| ||||| | || || || || | | || || || |||| Sbjct 132340 CGTTGGAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAA 132399 Query 21824 AGCTACCGGaaaaaaaCACGCCCTCCACAATGGCGAACGCCACCATGCGC 21873 |||| || || || | ||||| || ||||||||||| || ||| Sbjct 132400 AGCTGCCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGC 132449 >seq122 Length=254344 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || | || | ||| || || || ||||| || ||||| |||||| Sbjct 68449 TTTCCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCG 68508 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | ||| | ||| || ||||| ||||| || || ||||||||||||||||| || Sbjct 68509 GACAGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGG 68568 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||| || || || || || || ||||| || | || || || | ||| Sbjct 68569 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCC 68628 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || || || || || || || ||||| || ||||| Sbjct 68629 ACCTCCAGAGTGATCGTCTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 68678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505384375194400