Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 488 8e-133
seq14 91.5 2e-13
>seq1047
Length=31309
Score = 488 bits (540), Expect = 8e-133
Identities = 1234/1853 (67%), Gaps = 30/1853 (2%)
Strand=Plus/Plus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|| ||||| ||||||| ||| ||||| |||||||| || || | |||| |||||||||
Sbjct 16760 GCTGGTTTGGTACGTAAATAATACATCCCGGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 16819
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514
|| || ||||||||| || |||| || |||| |||||||| | || || |
Sbjct 16820 TGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGAT 16879
Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574
|| || ||||| ||||||| || ||||||||||| || | | || || ||| |||
Sbjct 16880 TGGTCAATGAATGCTCCTCGGTCGGCCGCCATTTTGATGCAAGTTTTCACAGAAATCTCC 16939
Query 68575 CAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG--CTCG-TATTTTGAATGGAT 68631
|| | || || | | | ||| | | |||| ||| | ||||| || ||
Sbjct 16940 CAGACCGTTTTGTACAGATTGCGGATGTGTTGCGGAATTTCCTCTATCTTTTGTATTGAG 16999
Query 68632 CCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAA 68691
||| | || | ||| | ||||| || ||||| | ||||| || || |||| |
Sbjct 17000 CCATTTTGGGCCAGAATCTTGTTCTTCATTTCATCGTCCCACAGTTCCAATTCAGTTAGA 17059
Query 68692 ACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAA 68751
|| | || | ||| |||| |||| |||||| || ||||| | || |||||| ||||
Sbjct 17060 TCTTTTAGCAAATGATGATTCACTACTTGAAACTCGCCAGAAAGTACCCTACGATTGTAG 17119
Query 68752 ATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCA 68811
| ||| || |||||||| | |||||| || || || || ||||| ||||| || ||
Sbjct 17120 ACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGTATTTGCGCAGTCGACGCG 17179
Query 68812 GTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTT 68871
|| |||||||| || | | | ||| | | |||||||| | || || ||||||
Sbjct 17180 GTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCACGCCATGTGTCACAATATT-TCTTTT 17238
Query 68872 A-GATGTTTCCAATCCCAAAGATCAGATGG-TACAACATTCCAAAGATCGTATTGTAGAA 68929
| | | ||||||||| | || | || | | | | ||| | ||||| || || |
Sbjct 17239 AAGCTCAGCCCAATCCCACAATTCCGTAGGCTTCTTC-TCCCACATGTCGTACTGAAGGA 17297
Query 68930 TTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTT 68989
|||| || || | ||||| ||||| ||| || || || |||||| | || | ||
Sbjct 17298 TTCCTTTGCTAACTGGACTTCCATCATATGATTCGTATGGACCATCCTGTGCGGCCAATT 17357
Query 68990 CACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 69049
| || || || || | || ||| | ||||| ||||| || || | | ||| | |
Sbjct 17358 CGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATTTGTTGATTCAACAGCT 17417
Query 69050 GTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAA 69109
| |||||| ||| ||| | || | | | | || || |||||||||| || || |
Sbjct 17418 GGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCA 17477
Query 69110 CCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAAT 69169
| || || || || || | || | | |||| || | | ||||| |||| ||||||||
Sbjct 17478 CTCCGATCCCTATCGGACGGTGGCGCATATTGGATCGCTTTGCTTCCGGAACAGGATAAT 17537
Query 69170 AATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACC-ACGTCCTTTAG- 69227
|||| ||||| || ||||| |||||||| | | || | ||| | || ||||||||
Sbjct 17538 AATTTATATCGATGATTTTGTTAAGATT-CTTAGTAACAGTTTTGGCTACTTCCTTTAGC 17596
Query 69228 TTTGAGAAAATCAAATCGTCCATC---TATAACAAACATATTCAGTGCTACAGATGCTAG 69284
|||| |||| ||| || | ||| | | |||||||| || | || | || || ||
Sbjct 17597 TTTGCGAAA-TCATATGTACGATCGGGTTTCACAAACATGTTTAAGGCAATCGAGGCCAG 17655
Query 69285 ATTACAAACTGCTACCTCATTAGAATTTGCA---TATTGTATTATCTCTGTACATAGATT 69341
||||| || || | |||| |||| | |||| || || || || || || ||
Sbjct 17656 GTTACACACAGCAATTTCATCT---TTTGAAGAGTATTCTACAATTTCGGTGCACAGGTT 17712
Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401
||| ||||| || || | ||||||||| |||||||| || || || || |||||
Sbjct 17713 TGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTGTA 17772
Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461
||| || | || |||||||||| ||| ||||| ||||| | ||| | |
Sbjct 17773 AAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTCTATAATTGCGAACCATAAATCTTG 17832
Query 69462 AGCATTTATT--ACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCG 69519
|| |||| | |||| || |||| ||| || || || || || ||||
Sbjct 17833 TGCCTTTACTTGACGGG--TGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCG 17890
Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579
|| || || ||||| || |||||||||||| || | || ||||| | ||||
Sbjct 17891 AACTCCTCACCCCATGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAGACTCCAC 17950
Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639
| || | | | || || | ||| || | ||| |||||||| || || || |
Sbjct 17951 ATTTCGTTGGCTTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATG 18010
Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699
|| || | | ||||| || || || || ||||| ||||| | |||||| | | |
Sbjct 18011 TCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTCAAATACA 18070
Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759
|| ||||||||| || ||||| || || | | |||| ||||| || || ||||| ||
Sbjct 18071 TCCCCATGCCATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGG 18130
Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819
|| | || | ||||| ||||| ||||| | ||||||||| | | ||| || || ||
Sbjct 18131 TCAACATAACGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATA 18190
Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT--AGACCTA 69877
||||| ||||| | |||||| ||||| | || | ||| | | || || || ||||
Sbjct 18191 CCATTCGTTCCTGCAATATATGTTCCTTTCGCCCTAAT-GCAGT-GTACATTCAGGCCTA 18248
Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937
| || || ||| ||||||||| | ||||| |||| | || || || || ||||| |
Sbjct 18249 TGCCACCAGCCGATTTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCCCTCGA 18308
Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997
||||||| || ||| | || || || ||| |||| ||| | || |||| | |
Sbjct 18309 TGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGTTGCTG 18368
Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057
|| ||| | || || || ||||| || || || || || |||| |||||| || |
Sbjct 18369 CAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTATCGCTCTGACAGCAAATTGTACGTCT 18428
Query 70058 CAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116
| || || || || ||||| ||| ||| || || || || |||||||| | ||| ||
Sbjct 18429 CGATGGCAGAATCAATATCTTCAC-CATGTATGCCGATAGCAACACGCATGAGCATGTGT 18487
Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176
|| || | || || | || || ||||| ||||| |||||| |||||| |||||
Sbjct 18488 TGCGGCCTCTCCACAATCTTCCCCTTAATTTTTAACAGATATGATCTTTCCAATGTTTTG 18547
Query 70177 AACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229
|| ||||| || ||||| |||||| | ||||| || || ||||||| ||
Sbjct 18548 AAACCAAAGTAATTGTAACCAAAGTCACGGTCGTAGATGATCGCAGAATTAAG 18600
>seq14
Length=264275
Score = 91.5 bits (100), Expect = 2e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664
|| ||||| | ||||| ||||| ||||||| || ||||| | || | |||||
Sbjct 132285 TTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTCGTTG 132344
Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724
|| || || || || ||||| || |||||||| || ||||| || |||||||||||
Sbjct 132345 GAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTG 132404
Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA 39777
||| |||||||| || || || ||||| || || || | | ||| |||||
Sbjct 132405 CCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTA 132457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686889738280800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |