Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1047 488 8e-133 seq14 91.5 2e-13 >seq1047 Length=31309 Score = 488 bits (540), Expect = 8e-133 Identities = 1234/1853 (67%), Gaps = 30/1853 (2%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || ||||| ||||||| ||| ||||| |||||||| || || | |||| ||||||||| Sbjct 16760 GCTGGTTTGGTACGTAAATAATACATCCCGGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 16819 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || ||||||||| || |||| || |||| |||||||| | || || | Sbjct 16820 TGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGAT 16879 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574 || || ||||| ||||||| || ||||||||||| || | | || || ||| ||| Sbjct 16880 TGGTCAATGAATGCTCCTCGGTCGGCCGCCATTTTGATGCAAGTTTTCACAGAAATCTCC 16939 Query 68575 CAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG--CTCG-TATTTTGAATGGAT 68631 || | || || | | | ||| | | |||| ||| | ||||| || || Sbjct 16940 CAGACCGTTTTGTACAGATTGCGGATGTGTTGCGGAATTTCCTCTATCTTTTGTATTGAG 16999 Query 68632 CCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAA 68691 ||| | || | ||| | ||||| || ||||| | ||||| || || |||| | Sbjct 17000 CCATTTTGGGCCAGAATCTTGTTCTTCATTTCATCGTCCCACAGTTCCAATTCAGTTAGA 17059 Query 68692 ACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAA 68751 || | || | ||| |||| |||| |||||| || ||||| | || |||||| |||| Sbjct 17060 TCTTTTAGCAAATGATGATTCACTACTTGAAACTCGCCAGAAAGTACCCTACGATTGTAG 17119 Query 68752 ATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCA 68811 | ||| || |||||||| | |||||| || || || || ||||| ||||| || || Sbjct 17120 ACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGTATTTGCGCAGTCGACGCG 17179 Query 68812 GTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTT 68871 || |||||||| || | | | ||| | | |||||||| | || || |||||| Sbjct 17180 GTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCACGCCATGTGTCACAATATT-TCTTTT 17238 Query 68872 A-GATGTTTCCAATCCCAAAGATCAGATGG-TACAACATTCCAAAGATCGTATTGTAGAA 68929 | | | ||||||||| | || | || | | | | ||| | ||||| || || | Sbjct 17239 AAGCTCAGCCCAATCCCACAATTCCGTAGGCTTCTTC-TCCCACATGTCGTACTGAAGGA 17297 Query 68930 TTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTT 68989 |||| || || | ||||| ||||| ||| || || || |||||| | || | || Sbjct 17298 TTCCTTTGCTAACTGGACTTCCATCATATGATTCGTATGGACCATCCTGTGCGGCCAATT 17357 Query 68990 CACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 69049 | || || || || | || ||| | ||||| ||||| || || | | ||| | | Sbjct 17358 CGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATTTGTTGATTCAACAGCT 17417 Query 69050 GTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAA 69109 | |||||| ||| ||| | || | | | | || || |||||||||| || || | Sbjct 17418 GGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCA 17477 Query 69110 CCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAAT 69169 | || || || || || | || | | |||| || | | ||||| |||| |||||||| Sbjct 17478 CTCCGATCCCTATCGGACGGTGGCGCATATTGGATCGCTTTGCTTCCGGAACAGGATAAT 17537 Query 69170 AATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACC-ACGTCCTTTAG- 69227 |||| ||||| || ||||| |||||||| | | || | ||| | || |||||||| Sbjct 17538 AATTTATATCGATGATTTTGTTAAGATT-CTTAGTAACAGTTTTGGCTACTTCCTTTAGC 17596 Query 69228 TTTGAGAAAATCAAATCGTCCATC---TATAACAAACATATTCAGTGCTACAGATGCTAG 69284 |||| |||| ||| || | ||| | | |||||||| || | || | || || || Sbjct 17597 TTTGCGAAA-TCATATGTACGATCGGGTTTCACAAACATGTTTAAGGCAATCGAGGCCAG 17655 Query 69285 ATTACAAACTGCTACCTCATTAGAATTTGCA---TATTGTATTATCTCTGTACATAGATT 69341 ||||| || || | |||| |||| | |||| || || || || || || || Sbjct 17656 GTTACACACAGCAATTTCATCT---TTTGAAGAGTATTCTACAATTTCGGTGCACAGGTT 17712 Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401 ||| ||||| || || | ||||||||| |||||||| || || || || ||||| Sbjct 17713 TGAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTGTA 17772 Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461 ||| || | || |||||||||| ||| ||||| ||||| | ||| | | Sbjct 17773 AAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTCTATAATTGCGAACCATAAATCTTG 17832 Query 69462 AGCATTTATT--ACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCG 69519 || |||| | |||| || |||| ||| || || || || || |||| Sbjct 17833 TGCCTTTACTTGACGGG--TGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTCG 17890 Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579 || || || ||||| || |||||||||||| || | || ||||| | |||| Sbjct 17891 AACTCCTCACCCCATGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAGACTCCAC 17950 Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639 | || | | | || || | ||| || | ||| |||||||| || || || | Sbjct 17951 ATTTCGTTGGCTTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATG 18010 Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699 || || | | ||||| || || || || ||||| ||||| | |||||| | | | Sbjct 18011 TCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTCAAATACA 18070 Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759 || ||||||||| || ||||| || || | | |||| ||||| || || ||||| || Sbjct 18071 TCCCCATGCCATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGG 18130 Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819 || | || | ||||| ||||| ||||| | ||||||||| | | ||| || || || Sbjct 18131 TCAACATAACGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATA 18190 Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT--AGACCTA 69877 ||||| ||||| | |||||| ||||| | || | ||| | | || || || |||| Sbjct 18191 CCATTCGTTCCTGCAATATATGTTCCTTTCGCCCTAAT-GCAGT-GTACATTCAGGCCTA 18248 Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937 | || || ||| ||||||||| | ||||| |||| | || || || || ||||| | Sbjct 18249 TGCCACCAGCCGATTTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCCCTCGA 18308 Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997 ||||||| || ||| | || || || ||| |||| ||| | || |||| | | Sbjct 18309 TGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGTTGCTG 18368 Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057 || ||| | || || || ||||| || || || || || |||| |||||| || | Sbjct 18369 CAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTATCGCTCTGACAGCAAATTGTACGTCT 18428 Query 70058 CAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 | || || || || ||||| ||| ||| || || || || |||||||| | ||| || Sbjct 18429 CGATGGCAGAATCAATATCTTCAC-CATGTATGCCGATAGCAACACGCATGAGCATGTGT 18487 Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176 || || | || || | || || ||||| ||||| |||||| |||||| ||||| Sbjct 18488 TGCGGCCTCTCCACAATCTTCCCCTTAATTTTTAACAGATATGATCTTTCCAATGTTTTG 18547 Query 70177 AACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 || ||||| || ||||| |||||| | ||||| || || ||||||| || Sbjct 18548 AAACCAAAGTAATTGTAACCAAAGTCACGGTCGTAGATGATCGCAGAATTAAG 18600 >seq14 Length=264275 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664 || ||||| | ||||| ||||| ||||||| || ||||| | || | ||||| Sbjct 132285 TTGAACATGAGACAGGCAAAGTCGCAATGTAAACCTTCATCGCGCGAGATCAGCTCGTTG 132344 Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 || || || || || ||||| || |||||||| || ||||| || ||||||||||| Sbjct 132345 GAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTTAGCCAGAAGATGGCAGCAAAGCTG 132404 Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA 39777 ||| |||||||| || || || ||||| || || || | | ||| ||||| Sbjct 132405 CCACTGAAGAAGATACCCTCGACGGCTGCGAACGCCACGATACGCTCGCCGTA 132457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686889738280800