Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1066 91.5 1e-13 seq14 84.2 2e-11 >seq1066 Length=67579 Score = 91.5 bits (100), Expect = 1e-13 Identities = 228/341 (67%), Gaps = 4/341 (1%) Strand=Plus/Minus Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924 |||||| | || || |||||||| || |||| ||| || |||||||| | || | ||| Sbjct 16299 AGGTGACTTGGGGCCAGTTTATGGGTTCCAGTGGCGTCACTTTGGAGCCACGTACGGCAC 16240 Query 40925 TATGT-ACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGA 40983 ||| || |||||| || || || | |||||| | | | || || | | Sbjct 16239 -ATGCCACGATGATTACACAGGCAAGGGTAAGGATCAGCTGGCGGAAATCATCGACAAGC 16181 Query 40984 TTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTAC 41043 | || | ||||| ||| || || || || |||| |||||||| |||| | | Sbjct 16180 TGAAGAACAATCCCACCGACCGTCGGATCATCCTGAGCGCCTGGAACCCGGTGGACATTC 16121 Query 41044 ATTTGATGGCATTGCCACCTTGTCATTTGTTATGT-CAGTTTTACGTTTGCAATGGTGAA 41102 | ||||| | |||||||| || | ||| || ||||||||||| ||| ||||| Sbjct 16120 CCATTATGGCTCTTCCACCTTGCCACT-GTTTGGTACAGTTTTACGTGGCCAACGGTGAG 16062 Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162 ||||| || || |||| ||| |||| | || | || | || || || || ||||| Sbjct 16061 CTGTCGTGCCAGATGTACCAACGATCCGCCGATGTAGGGTTGGGCGTGCCATTCAACATT 16002 Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 ||||| || | ||||| ||| | ||||| || || || || Sbjct 16001 GCGAGCTACTCGCTGCTAACGCACATGATCGCGCATGTAAC 15961 >seq14 Length=264275 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || ||||| |||| || || || || ||||| || ||||| ||||| || ||| Sbjct 132442 GTGGCGTTCGCAGCCGTCGAGGGTATCTTCTTCAGTGGCAGCTTTGCTGCCATCTTCTGG 132383 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 ||||||| || || ||||||| || ||||||| || || ||| | || || ||| Sbjct 132382 CTAAAGAAGCGTGGCCTGATGCCGGGTCTGACGTTCTCCAACGAGCTGATCTCGCGCGAT 132323 Query 44255 GAAGGCTTACATTGCGATTTTGCTTG 44280 ||||| ||||||||||| ||||| || Sbjct 132322 GAAGGTTTACATTGCGACTTTGCCTG 132297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397445246331100