Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 165 7e-36
seq111 113 4e-20
>seq1047
Length=31309
Score = 165 bits (182), Expect = 7e-36
Identities = 1182/1874 (63%), Gaps = 75/1874 (4%)
Strand=Plus/Plus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || ||||| ||||| ||||| || || ||||| || ||||||||||| ||
Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTG--GTAATTGG 130523
||||| || || || || || || || || || | |||| ||| || |
Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAAT--TGATGTTAGTTTACCGTAGTTTG 16847
Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583
| | || ||| || |||| || |||||||| ||||| || || || | ||| || |
Sbjct 16848 GCTCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCG 16907
Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642
|||| | || ||| | ||| | |||||||| | || ||||| |||| | |||
Sbjct 16908 CCATTTTGATGCAAGTTTTCACAGAA-ATCTCCCAGACCGTTTTGTACAGATTGCGGATG 16966
Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGC 130702
|||| || || | | ||| ||| | || || | ||| | ||| | ||| |
Sbjct 16967 TGTTGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTC 17026
Query 130703 ATACTTTTATCGTACAA----TCCAAG-CTGTACAAGATCTTTTACCAAATGATTATTAA 130757
|| || ||||| | | ||||| | || |||||||||| |||||||| ||| |
Sbjct 17027 AT---TTCATCGTCCCACAGTTCCAATTCAGTT--AGATCTTTTAGCAAATGATGATTCA 17081
Query 130758 TGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAA 130817
| |||||| || |||| || || | | | ||| | || ||| | |||||||
Sbjct 17082 CTACTTGAAACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAA 17141
Query 130818 AGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATA 130877
| ||||||||||| |||| |||||| || || | ||||| ||||| || | | |
Sbjct 17142 AAGATTCGTTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCA 17201
Query 130878 GAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAG 130937
| ||||| || | || || ||| || |||| || | ||| |||||||||| |
Sbjct 17202 GGGAATTGCGCACGCCATGTGTCACAATATTTCTTTTAAGCTCAGCCCAATCCCACAATT 17261
Query 130938 AGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGG 130997
||||| || || | |||||| || | || || || ||||| || | |||||
Sbjct 17262 CCGTAGGCTT---CTTCTCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTC 17318
Query 130998 ATTCGAACGATTCGTA--GA--TTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAA 131053
|| | |||||||| || |||| | || |||| ||| ||| ||||| |
Sbjct 17319 CATCATATGATTCGTATGGACCATCCTGTG---CG-GCCAATTCGCAGCTCGCTTCAAGG 17374
Query 131054 GCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCG 131113
|||||| | ||||||||||| ||||||| ||| || | | |||| | || |||
Sbjct 17375 GCTCCGAAGTAAATGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCG 17434
Query 131114 TAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGT 131173
||||| ||| || || ||||| ||||| | || || | || | || | |||
Sbjct 17435 TAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGA 17494
Query 131174 CTATG-----TTTTAAATTACATT--TACGCGAACATTCGGTGGGATAAAGGTTAATGTC 131226
| || | || || | || | | ||||| |||||| || || ||
Sbjct 17495 CGGTGGCGCATATTGGATCGCTTTGCTTCCGGAACA-------GGATAATAATTTATATC 17547
Query 131227 AATTATTTTGTTTAAATTGCGCACT-ACAATTTGTGTGAC-GCTTTTCAATTTGTCGAAA 131284
|| |||||||| | ||| | | | ||| ||| | || | ||| |||| |||||
Sbjct 17548 GATGATTTTGTTAAGATT-CTTAGTAACAGTTTTGGCTACTTCCTTTAGCTTTG-CGAAA 17605
Query 131285 TCAAACGTGCCAGTTTCGAGGTTTACAAA-TTGATTTACACATATTGACGCCAGATTACA 131343
||| | || | | ||| | || ||||| || || | || || || ||||| |||||
Sbjct 17606 TCATATGTACGA---TCGGGTTTCACAAACATGTTTAAGGCA-ATCGAGGCCAGGTTACA 17661
Query 131344 AACTGCCGTTTCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTT 131403
|| || |||| || | | || | |||||||||| ||||| || | |||
Sbjct 17662 CACAGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTGCACAGGTTTGAACACTT 17721
Query 131404 TATGGTGCCCAAATTTTGTTGATTGCTTTTAGCATT-CACATGGTCCTTGTACATCATGT 131462
|| || || | |||||| || || || ||| ||| ||| || ||||| | |||||
Sbjct 17722 GATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCAC-GCATCTTTGTAAAGCATGT 17780
Query 131463 AGGGCGTGCCCGTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGA 131520
| ||| || ||||| || || | ||| |||| | |||| | | | | | ||
Sbjct 17781 AAGGCACTCCAGTTTCAACCTGTGATTCTATAA--TTGCGAACCATAAATCTTGTGCCTT 17838
Query 131521 CAATTGATATTTGTATTGGC---CGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTT 131577
| |||| || | | | |||| ||||| ||| | |||| || |
Sbjct 17839 TACTTGACGGGTGAAACGACCCTCGCG---CTCGTAGCCAGTGTAGAGTTTTTCGAACTC 17895
Query 131578 TTGGCCAAACGAACTGTC---CAAATTGGGACATTCGCTGGGACACATTAGCGACCACAC 131634
| || | | | || ||| ||||| ||| || |||||||| |||||
Sbjct 17896 CT---CACCCCATGTCTCCGACAATCCAGGACAGTCGTGAGGGCACATTAGACTCCACAT 17952
Query 131635 GCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATC 131694
|||| ||| || |||| ||| |||||||| || | ||| | |||||| |||| ||
Sbjct 17953 TTCGTTGGCTTCCACACGCTGCATGAACAAATCAGGAATCCACAGCGCGTAGAACATGTC 18012
Query 131695 TCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTC 131754
|| || ||||||| | || | | ||||| | || ||||| || || | ||
Sbjct 18013 CCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTTTTTAGATCCAAAAACTCAAATACATC 18072
Query 131755 CGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATT 131811
| ||||||| || |||| ||| | || | || || ||| ||||| ||||| |
Sbjct 18073 CCCATGCCATGGCTCCAGATAGATAGCAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTC 18132
Query 131812 AACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCC 131871
||||| ||| | | || ||||| ||||||| ||| || | |||||||| | | ||
Sbjct 18133 AACATAACGTGCAGTATTATTGTAGACGCGCAGCATCGGTACTAAACCGTTCGAAATACC 18192
Query 131872 ATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACC 131931
||| || | ||| || | || || || || || ||| || || || || || ||
Sbjct 18193 ATTCGTTCCTGCAATATATGTTCCTTTCGCCCTAATGCAGTGTACATTCAGGCCTATGCC 18252
Query 131932 TCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGC 131990
|| |||| |||||||||| | || || | | ||||| | || || || || | ||
Sbjct 18253 ACCAGCCG-ATTTAGAGATCAAGGCACACTGTTTAAGAGTATCGTAAATTCCCTCGATGC 18311
Query 131991 TGTC-CGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCT 132049
| || || || ||| || | ||||| || |||| || | | || | ||
Sbjct 18312 TATCGTCCGACATTGT-GAGCAGGAAGCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCA 18370
Query 132050 GAAAACAATGTGGGGCTGGCGTGTGTAAAAAGTTTTTTGGCCATGCACCGATACGATTGT 132109
| ||||| || || ||||| ||||| | | | || | |||| |
Sbjct 18371 GCAAACATGGTTGGCGAAGCGTGCGTAAAGTATCGCTCTGACAGCAAATTGTACGTCTCG 18430
Query 132110 ATAGCGGACTCGATATCGCCCAGATGTATGGTCAATGCGACCCGCATGTACATGTGTTGA 132169
|| || || || ||||| | ||||||| | || || |||||| |||||||||
Sbjct 18431 ATGGCAGAATCAATATCTTCACCATGTATGCCGATAGCAACACGCATGAGCATGTGTTGC 18490
Query 132170 ATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAAATAACCGTTTTCCAAAGTTTTGAAA 132229
| ||| | | || || | ||||| | || ||| ||||||| |||||||||
Sbjct 18491 GGCCTCTCCACAATCTTCCCCTTAATTTTTAACAGATATGATCTTTCCAATGTTTTGAAA 18550
Query 132230 CCAAAATATTTGTA 132243
||||| || |||||
Sbjct 18551 CCAAAGTAATTGTA 18564
>seq111
Length=461598
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| |||| |||| ||| | ||| || || || ||||||||||||||| |
Sbjct 359652 CCACCACGCAGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGAC 359711
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || ||||||| ||||| || || ||| | || |||||||| |||||||||||
Sbjct 359712 AGAGTACGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGA 359771
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| |||| | || | || || | || || ||
Sbjct 359772 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 359831
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | || ||||| || ||||| || ||||| |||||
Sbjct 359832 TCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424922902868640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |