Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 181 1e-40
seq372 154 2e-32
seq1567 82.4 1e-10
>seq1047
Length=31309
Score = 181 bits (200), Expect = 1e-40
Identities = 776/1219 (64%), Gaps = 18/1219 (1%)
Strand=Plus/Plus
Query 110867 TCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAG 110926
||||||||||| ||||||| | |||| | | ||| || ||| | | ||| ||
Sbjct 17276 TCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATATGATTCGTAT 17335
Query 110927 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 110986
| ||| | | | |||||||| |||||||| || |||| | || || |||||||||
Sbjct 17336 GGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCA 17395
Query 110987 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATA 111046
|| || | ||||| | || |||||| || || | | || ||| ||| ||
Sbjct 17396 AACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATG 17455
Query 111047 AATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTT 111106
|| |||| || | ||||| || || | || || || | ||| |||||||| || |
Sbjct 17456 AAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATATTGGA---T 17512
Query 111107 CGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 111163
||| | || ||| |||||| ||||| | || |||| | ||| ||||| || |||
Sbjct 17513 CGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATTCTTAGTA 17572
Query 111164 ACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACA 111223
||| | || | | ||| | || ||| | ||||| | || ||| || || |||
Sbjct 17573 ACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAATCATATGTACGA---TCGGGTTTCACA 17629
Query 111224 TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 111283
|| | | ||| || || |||| || || ||||| | ||||| || | |||
Sbjct 17630 AACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCATCTTTTGAAGAGTAT 17689
Query 111284 TCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 111343
|||| |||||| || || | ||| |||| ||| ||||| || | ||| | |||||||||
Sbjct 17690 TCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTACTC 17749
Query 111344 TTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTG 111403
|| ||||||||||| ||||| |||||||| ||| || || || ||||||||
Sbjct 17750 TTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGATTCT 17809
Query 111404 AGAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGC-GTTGGCCCGTCCCTCCGCCTC 111462
| ||| || ||| | ||| || ||| || | | || || ||||| |||
Sbjct 17810 ATAATTGCGAACCATAAATCTTGTGCCTTTAC-TTGACGGGTGAAACGACCCTCGCGCTC 17868
Query 111463 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 111522
||| |||||||| ||| |||||||||||| | || || | || || |
Sbjct 17869 GTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAGGACAGTC 17928
Query 111523 GTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCT 111580
|| || || | ||| ||| | | || | || || |||| |||||| | ||
Sbjct 17929 GTGAGGGCACATTAGACTCCA--CATTTCGTTGGCTTCCACACGCTGCATGAACAAATCA 17986
Query 111581 GGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGT 111640
||||||||||| | | || | || || || ||||||| | || ||| |
Sbjct 17987 GGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTCTTT 18046
Query 111641 CGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGAT 111700
|| || | ||||| | | |||| | ||||||||||| ||||||| || | | |
Sbjct 18047 TTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGCAAAGGCT 18106
Query 111701 CCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757
|| ||| || |||| | ||||| || || || || | ||||| |||
Sbjct 18107 CCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGCGCAGC 18166
Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817
|| || | | ||| | || |||||| || || |||| | | || || ||
Sbjct 18167 ATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCGCCCTA 18226
Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877
| || | | || || || || |||||| | || ||||| ||||||| ||
Sbjct 18227 ATGCAGTGTACATTCAGGCCTATGCCACCAGCCGATTTAGAGATCAAGGCACACTGTTTA 18286
Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937
||||| | || || || | ||| || ||| | | || |||||||| |||
Sbjct 18287 AGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGGACGAC 18346
Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997
| ||||| | | | || | ||| || | |||||| | ||||| | || |
Sbjct 18347 AGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAAGTATCGC 18406
Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057
| |||| | | ||| ||||| | | |||||||||| ||||| || || ||||||||
Sbjct 18407 TCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTATGCCGATA 18466
Query 112058 GCGACCCGCATGAACATGT 112076
|| || ||||||| |||||
Sbjct 18467 GCAACACGCATGAGCATGT 18485
>seq372
Length=50997
Score = 154 bits (170), Expect = 2e-32
Identities = 279/402 (69%), Gaps = 6/402 (1%)
Strand=Plus/Plus
Query 9156 CGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAAC 9215
||| |||| ||||| || |||| ||| ||| || || || ||| |||| || |||
Sbjct 39722 CGCTTCTACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAAC 39781
Query 9216 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 9274
||| | || |||||||| || |||||| || | | | ||| | | ||| | | ||
Sbjct 39782 GAGAAAACTCCCTTCTATCCCCGCTCGCCGTATGCATGTGCCAAGATGTACGG-ATACTG 39840
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| |||| | |||||||||||| | |||| ||||||| ||| ||| || || |||||
Sbjct 39841 GATCGTGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAA 39900
Query 9335 CCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CG-AGGGTATC 9392
||||||||| || |||| || | | ||||||||| ||||| || || ||| |
Sbjct 39901 CCATGAATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGC 39960
Query 9393 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 9452
|| | ||| | || | |||| | | | || ||||||| | | | || ||
Sbjct 39961 GAAGATATC--GCTCGGGCAGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGA 40018
Query 9453 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 9512
|| ||||||||||||||||||||||| || || |||||||| ||| | || || ||| ||
Sbjct 40019 GACTGGGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAA 40078
Query 9513 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 9554
| || || | ||| | || || || ||||| ||||| |||
Sbjct 40079 CCGGAAGACTTTGTCATTGCCACCGGCGAGACACATTCGGTG 40120
>seq1567
Length=65240
Score = 82.4 bits (90), Expect = 1e-10
Identities = 124/174 (71%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 181805 GTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTT 181864
||| || |||||| | | ||||||||||| ||||| | || | || |||||||||||
Sbjct 48455 GTCCTTGCCACCCGTCAACCGCGTACCAAACTGACCGCCCGGGTACAGCAGGTTAATGTT 48396
Query 181865 GTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCA-AGGGACACTTCAC 181923
||| || | ||| | ||||| || | ||| || | ||| || ||| ||| |
Sbjct 48395 GTTGCTGCCGACAAAGTTCTGGGCCAGATTGATGATAGT-GCTGCACAGCGACTGTTCGC 48337
Query 181924 CGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCA 181977
||||||| ||||| ||| | ||||| || | | |||| ||| ||||||||||
Sbjct 48336 CGTGGTGATAAGCGGACATTTCCGCCACCGAACCGGCCAGCTGGGCCACCTTCA 48283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628014572112000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |