Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1047 138 1e-27 seq372 132 6e-26 >seq1047 Length=31309 Score = 138 bits (152), Expect = 1e-27 Identities = 434/672 (65%), Gaps = 3/672 (0%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 |||| ||| | |||||||| ||||| | || |||||||| | ||||| || || || Sbjct 17117 TAGACATTTGAAGTGTATGGTTCAAAAGATTCGTTGTTACCGAGTATTTGCGCAGTCGAC 17176 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | || ||| || || | || | | | ||| | Sbjct 17177 GCGGTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCACGCCATGTGTCACAATATTTCTT 17236 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361 || || | |||| || | | | | || | || |||||| || |||| ||| Sbjct 17237 TTAAGCTCAGCCCAATCCCACAATTCCGTAGGCTTCTTCTCCCACATGTCGTACTGAAGG 17296 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421 || |||| | |||| ||| ||| ||| || ||||| || || | |||||| Sbjct 17297 ATTCCTTTGCTAACTGGACTTCCATCATATGATTCGTATGGACCATCCTGTGCGGCCAAT 17356 Query 118422 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCC 118481 ||| ||||||| || |||||| || || || |||||||| || | ||||| | Sbjct 17357 TCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGTTTCAAACATTTGTTGATTCAACAGC 17416 Query 118482 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGG 118541 | ||| || || || | | | | || ||| || || |||| || | ||||| Sbjct 17417 TGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGC 17476 Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAA 118601 || |||| || || || || || | |||||| || | || | || |||||| Sbjct 17477 ACTCCGATCCCTATCGGACGGTGGCGCATATTGGATCGCTTTGCTTCCGGAACAGGATAA 17536 Query 118602 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 118661 |||| ||||||| | | || ||||| || || ||| || | | ||| | ||| Sbjct 17537 TAATTTATATCGATGATTTTGTTAAGATTCTTAGTAACAGTTTTGGCTACTTCCTTTAGC 17596 Query 118662 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 ||| || ||||| | | ||| || || ||| || | | ||| || || ||| Sbjct 17597 TTTGCGAAATCATATGTACGA---TCGGGTTTCACAAACATGTTTAAGGCAATCGAGGCC 17653 Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781 || |||||||||| | ||||| || || ||| |||| |||||| ||||||| |||| Sbjct 17654 AGGTTACACACAGCAATTTCATCTTTTGAAGAGTATTCTACAATTTCGGTGCACAGGTTT 17713 Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841 |||| ||| || || || | || | || || ||| || |||||||| |||||| Sbjct 17714 GAACACTTGATCGTTCCGATATTTTGCTGGTTACTCTTACGATTGCACGCATCTTTGTAA 17773 Query 118842 AGCATGTATGGC 118853 |||||||| ||| Sbjct 17774 AGCATGTAAGGC 17785 >seq372 Length=50997 Score = 132 bits (146), Expect = 6e-26 Identities = 283/412 (69%), Gaps = 8/412 (2%) Strand=Plus/Plus Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 11861 || |||||||| |||| ||| ||| || ||||| || | || || || ||| | Sbjct 39728 TACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAACGAGAAA 39787 Query 11862 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TGCGGCACATTGGCTCG 11919 || ||||||||||| || || |||| | | | | ||| | | ||| | | ||| ||| Sbjct 39788 ACTCCCTTCTATCCCCGCTCGCCGTATG-CATGTGCCAAGATGTACGG-ATACTGGATCG 39845 Query 11920 TGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACG 11979 ||| |||||||| || | || | | | ||||| ||| || ||||| |||||||| | Sbjct 39846 TGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAACCATG 39905 Query 11980 AGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGAT-GGTATCAAACA 12037 | || ||||| || || | |||| ||||| |||||||| || | ||| | || | Sbjct 39906 AATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGCGAAGA 39965 Query 12038 AATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTG 12097 |||| |||| || ||| | | | || |||| || ||| | || || | ||||| Sbjct 39966 TATCGCT-CGGGC-AGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGAGACTG 40023 Query 12098 GGGACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGA 12157 ||| || || ||||||||||| || || |||||||| | | || || || | |||| Sbjct 40024 GGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAACCGGA 40083 Query 12158 CGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 12209 || | |||| | || || || |||||||| || || | |||||||| ||| Sbjct 40084 AGACTTTGTCATTGCCACCGGCGAGACACATTCGGTGCGCGAGTTCGTGGAG 40135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618418038423200