Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1047 141 1e-28 seq372 136 5e-27 >seq1047 Length=31309 Score = 141 bits (156), Expect = 1e-28 Identities = 341/513 (66%), Gaps = 5/513 (1%) Strand=Plus/Minus Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || ||||||||||||||||| || || || | |||||||| || | ||| | || | Sbjct 17784 CCTTACATGCTTTACAAAGATGCGTGCAATCGTAAGAGTAACCAGCAAAATATCGGAACG 17725 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 |||||| |||| || || || || ||||| | |||| | |||||||| | ||| Sbjct 17724 ATCAAGTGTTCAAACCTGTGCACCGAAATTGTAGAATACTCTTCAAAAGATGAAATTGCT 17665 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106 ||||||||||| || || || || | || || |||| | || || |||| | Sbjct 17664 GTGTGTAACCTGGCCTCGATTGCCTTAAACATGTTTGTGAAACCCGA---TCGTACATAT 17608 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 |||| | ||| || | ||||| | |||||||| || || || || |||| | | || Sbjct 17607 GATTTCGCAAAGCTAAAGGAAGTAGCCAAAACTGTTACTAAGAATCTTAACAAAATCATC 17548 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 |||| ||||| ||| || ||| | || ||| |||||| | |||||||| || Sbjct 17547 GATATAAATTATTATCCTGTTCCGGAAGCAAAGCGATCCAATATGCGCCACCGTCCGATA 17488 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTGATTC 105285 || |||| || || || | || |||| |||| |||| | |||||| | | || Sbjct 17487 GGGATCGGAGTGCAAGGCATGGCAGATGCTTTCA-TCTTGATGCGCCACCCTTACGAAAG 17429 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 || ||||| || | ||| | || ||||| ||||| || || || ||||| Sbjct 17428 TGAAGAAGCCCAGCTGTTGAATCAACAAATGTTTGAAACCATTTACTTCGGAGCCCTTGA 17369 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 ||||| | || ||||| | ||||||||||| ||| | | ||| || ||||| Sbjct 17368 AGCGAGCTGCGAATTGGCCGCACAGGATGGTCCATACGAATCATATGATGGAAGTCCAGT 17309 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGA 105438 | |||| | ||||| | || |||||||| Sbjct 17308 TAGCAAAGGAATCCTTCAGTACGACATGTGGGA 17276 >seq372 Length=50997 Score = 136 bits (150), Expect = 5e-27 Identities = 275/402 (68%), Gaps = 6/402 (1%) Strand=Plus/Plus Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291 ||| | |||||||| || || || ||| ||| || ||||| || || || || ||| Sbjct 39722 CGCTTCTACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAAC 39781 Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 7350 ||| | || |||||||| || |||||| || | | | ||| | | ||| | | || Sbjct 39782 GAGAAAACTCCCTTCTATCCCCGCTCGCCGTATGCATGTGCCAAGATGTACGG-ATACTG 39840 Query 7351 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7410 | |||| | |||||||||||| | |||| ||||||| ||| ||| || || ||||| Sbjct 39841 GATCGTGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAA 39900 Query 7411 CCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CG-AGGGTATC 7468 ||||||||| || |||| || | | ||||| || ||||| || || ||| | Sbjct 39901 CCATGAATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGC 39960 Query 7469 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGA 7528 || | ||| | || | |||| | | | || ||||||| | | | | || Sbjct 39961 GAAGATATC--GCTCGGGCAGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGA 40018 Query 7529 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 7588 || ||||||||||||||||||||||| || || |||||||| ||| | || || ||| || Sbjct 40019 GACTGGGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAA 40078 Query 7589 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCATACAGTG 7630 | || || | ||| | || || || ||||| ||| | ||| Sbjct 40079 CCGGAAGACTTTGTCATTGCCACCGGCGAGACACATTCGGTG 40120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583244614512800