Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1047 141 1e-28
seq372 136 5e-27
>seq1047
Length=31309
Score = 141 bits (156), Expect = 1e-28
Identities = 341/513 (66%), Gaps = 5/513 (1%)
Strand=Plus/Minus
Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
|| ||||||||||||||||| || || || | |||||||| || | ||| | || |
Sbjct 17784 CCTTACATGCTTTACAAAGATGCGTGCAATCGTAAGAGTAACCAGCAAAATATCGGAACG 17725
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
|||||| |||| || || || || ||||| | |||| | |||||||| | |||
Sbjct 17724 ATCAAGTGTTCAAACCTGTGCACCGAAATTGTAGAATACTCTTCAAAAGATGAAATTGCT 17665
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106
||||||||||| || || || || | || || |||| | || || |||| |
Sbjct 17664 GTGTGTAACCTGGCCTCGATTGCCTTAAACATGTTTGTGAAACCCGA---TCGTACATAT 17608
Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166
|||| | ||| || | ||||| | |||||||| || || || || |||| | | ||
Sbjct 17607 GATTTCGCAAAGCTAAAGGAAGTAGCCAAAACTGTTACTAAGAATCTTAACAAAATCATC 17548
Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226
|||| ||||| ||| || ||| | || ||| |||||| | |||||||| ||
Sbjct 17547 GATATAAATTATTATCCTGTTCCGGAAGCAAAGCGATCCAATATGCGCCACCGTCCGATA 17488
Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTGATTC 105285
|| |||| || || || | || |||| |||| |||| | |||||| | | ||
Sbjct 17487 GGGATCGGAGTGCAAGGCATGGCAGATGCTTTCA-TCTTGATGCGCCACCCTTACGAAAG 17429
Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345
|| ||||| || | ||| | || ||||| ||||| || || || |||||
Sbjct 17428 TGAAGAAGCCCAGCTGTTGAATCAACAAATGTTTGAAACCATTTACTTCGGAGCCCTTGA 17369
Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405
||||| | || ||||| | ||||||||||| ||| | | ||| || |||||
Sbjct 17368 AGCGAGCTGCGAATTGGCCGCACAGGATGGTCCATACGAATCATATGATGGAAGTCCAGT 17309
Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGA 105438
| |||| | ||||| | || ||||||||
Sbjct 17308 TAGCAAAGGAATCCTTCAGTACGACATGTGGGA 17276
>seq372
Length=50997
Score = 136 bits (150), Expect = 5e-27
Identities = 275/402 (68%), Gaps = 6/402 (1%)
Strand=Plus/Plus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | |||||||| || || || ||| ||| || ||||| || || || || |||
Sbjct 39722 CGCTTCTACCAAGCATCCACCTCCGAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAAC 39781
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 7350
||| | || |||||||| || |||||| || | | | ||| | | ||| | | ||
Sbjct 39782 GAGAAAACTCCCTTCTATCCCCGCTCGCCGTATGCATGTGCCAAGATGTACGG-ATACTG 39840
Query 7351 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7410
| |||| | |||||||||||| | |||| ||||||| ||| ||| || || |||||
Sbjct 39841 GATCGTGATCAATTACCGCGAGGCGTACGATATGTTTGCCTGCAACGGGATTCTGTTCAA 39900
Query 7411 CCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CG-AGGGTATC 7468
||||||||| || |||| || | | ||||| || ||||| || || ||| |
Sbjct 39901 CCATGAATCGCCCCGACGCGGAGAGAATTTTGTGACCCGTAAGATCACTCGTTCGGTCGC 39960
Query 7469 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGA 7528
|| | ||| | || | |||| | | | || ||||||| | | | | ||
Sbjct 39961 GAAGATATC--GCTCGGGCAGCAGGAATGCGTCGAGCTGGGTAATCTCGATTCCAAGCGA 40018
Query 7529 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 7588
|| ||||||||||||||||||||||| || || |||||||| ||| | || || ||| ||
Sbjct 40019 GACTGGGGTCACGCGAAGGACTATGTGGAGGCGATGTGGCTGATGATGCAGCAGGAGAAA 40078
Query 7589 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCATACAGTG 7630
| || || | ||| | || || || ||||| ||| | |||
Sbjct 40079 CCGGAAGACTTTGTCATTGCCACCGGCGAGACACATTCGGTG 40120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583244614512800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |