Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq966 192 7e-44
seq610 188 8e-43
seq673 172 6e-38
seq111 161 1e-34
seq122 154 2e-32
seq1567 152 6e-32
seq372 113 5e-20
seq14 84.2 2e-11
>seq966
Length=353950
Score = 192 bits (212), Expect = 7e-44
Identities = 180/229 (79%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || || ||||| || || || ||||| || || || ||||| ||| ||
Sbjct 223 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACCCTGGAGGTCGAGCCATC 282
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| |||| || |||||||||| |||||||| ||||| || ||||||||||| ||
Sbjct 283 CGATACAATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATTCCTCCAGATCA 342
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || ||||| ||||| || ||||||| |||||| || | ||||| ||
Sbjct 343 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACGCTGTCCGACTACAA 402
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
||||||||||||| ||||| |||||||| | |||||||| || |||
Sbjct 403 CATCCAAAAGGAATCGACTCTCCATCTAGTGCTCCGTCTTCGTGGGGGA 451
Score = 170 bits (188), Expect = 2e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471
|| || || ||||| || || || ||||| || ||||| ||||| ||| || ||||
Sbjct 2 ATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATACG 61
Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531
|||| || |||||||||| |||||||| ||||| || || |||||||| |||||||||
Sbjct 62 ATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGT 121
Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591
|| || || ||||| ||||| || ||||||| |||||| || | ||||| || | ||
Sbjct 122 CTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCAG 181
Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||||||| ||||| ||||| || | |||||||| || |||
Sbjct 182 AAGGAATCGACTCTCCATCTGGTGCTCCGTCTTCGTGGAGGA 223
>seq610
Length=159711
Score = 188 bits (208), Expect = 8e-43
Identities = 179/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || || ||||| || || || ||||| || ||||| ||||| ||| ||
Sbjct 159344 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATC 159403
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| |||| || |||||||||| |||||||| ||||| || || |||||||| ||
Sbjct 159404 CGATACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCA 159463
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || ||||| ||||| || ||||||| |||||| || | ||||| ||
Sbjct 159464 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAA 159523
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| |||||||| ||||| ||||| || |||||||||| || |||
Sbjct 159524 CATCCAGAAGGAATCGACTCTCCATCTGGTACTGCGTCTTCGTGGGGGA 159572
Score = 178 bits (196), Expect = 1e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || || ||||| || ||||| ||||| ||| ||
Sbjct 159117 ATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCC 159176
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || |||||||||| |||||||| ||||| || || |||||||| |||
Sbjct 159177 GATACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAG 159236
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || ||||||| |||||| || | ||||| ||
Sbjct 159237 CAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAAC 159296
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| |||||||| ||||| ||||| || | ||||| || || |||
Sbjct 159297 ATCCAGAAGGAATCGACTCTCCATCTGGTGCTCCGTCTCCGTGGAGGA 159344
>seq673
Length=25255
Score = 172 bits (190), Expect = 6e-38
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || || || ||||| ||||||||||| || || || ||||| ||| ||
Sbjct 24640 AATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCATC 24581
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | ||| ||||||| || || ||||||||||||||||| || ||||| ||
Sbjct 24580 GGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCA 24521
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| || || || || ||||| || ||||| | |||||||| | ||||| ||
Sbjct 24520 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTACAA 24461
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || ||||| || |||| ||||| |||||
Sbjct 24460 CATCCAGAAGGAGTCGACCCTGCATCTTGTGCTGCGACTTCGTGGTGG 24413
>seq111
Length=461598
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| ||||| || || || || ||||| || || |||||||| ||| |
Sbjct 359878 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCG 359819
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| ||||||| || || |||||||||||||| ||||| || || |||
Sbjct 359818 GATACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCAG 359759
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || || || | ||||| || | ||||| |||
Sbjct 359758 CAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGACGGACGTACTCTGTCCGACTACAAT 359699
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| || |||||||| || |||| || || |||||
Sbjct 359698 ATTCAGAAGGAATCGACGCTTCATCTGGTGCTGCGCCTGCGTGGTGG 359652
>seq122
Length=254344
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || |||||| | || |||||||| || ||||| ||||| ||| |
Sbjct 68678 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCG 68619
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||||| || || |||||||||||||| ||||| ||||| |||
Sbjct 68618 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 68559
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || ||||| || || || | |||||||| | ||||||||
Sbjct 68558 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAAC 68499
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| ||||| || || || || | ||| | ||||| || ||||||
Sbjct 68498 ATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGTGGA 68451
>seq1567
Length=65240
Score = 152 bits (168), Expect = 6e-32
Identities = 285/419 (68%), Gaps = 0/419 (0%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043
|| || || ||||| ||||| |||||||| | | | ||| ||||| ||| |
Sbjct 48216 GATGGGCTGAAGCCCGGCCAGCGTAAGGTGATGTTCACGTGCTTCAAGCGTAACGATAAG 48275
Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103
| || |||||||||| |||||| | || | ||||| || | || |||||||||
Sbjct 48276 CGAGAGGTGAAGGTGGCCCAGCTGGCCGGTTCGGTGGCGGAAATGTCCGCTTATCACCAC 48335
Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163
||||| |||||| |||| || |||| || || |||||||||||||| ||
Sbjct 48336 GGCGAACAGTCGCTGTGCAGCACTATCATCAATCTGGCCCAGAACTTTGTCGGCAGCAAC 48395
Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223
||| | ||| | || | || || |||||||| || ||| | | |||||||||||
Sbjct 48396 AACATTAACCTGCTGTACCCGGGCGGTCAGTTTGGTACGCGGTTGACGGGTGGCAAGGAC 48455
Query 32224 GCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGAC 32283
|| || | ||||||||||| ||| || || | | ||| ||| || ||| |
Sbjct 48456 AGCGCTAGTCCGCGTTACATCTTTACCATGCTGTCAACCTTGACACGCCTCATCTTCCAT 48515
Query 32284 CCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTG 32343
||| |||||| | ||||| |||| | | || ||| |||||| | ||||||||
Sbjct 48516 CCGCTCGACGATCCACTGCTCGAGTATCAGTACGAGGACAATCAGCGTATTGAGCCGGTA 48575
Query 32344 TTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
| || ||| | |||||||| | ||||||||||||| ||||| ||||| |||||
Sbjct 48576 TGGTATCTGCCGATCATTCCGATGTTGCTGGTGAACGGTGCCGAAGGTATCGGCACGGG 48634
Score = 104 bits (114), Expect = 3e-17
Identities = 173/250 (69%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 31194 AATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGA 31253
||| | ||| || || || || || || || ||| ||||| | | ||| |||| | |
Sbjct 47357 AATCAAGGGCATCCCAAAACTGGAGGATGCGAACGATGCCGGGTCGCGCAACTCGCTCAA 47416
Query 31254 GTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAG 31313
|| ||||| || |||| ||||| |||||||| || || | || | |||| ||| |
Sbjct 47417 CTGTACGCTCATCCTTACGGAGGGAGACTCGGCTAAAACGTTGGCCGTGTCTGGGTTGGG 47476
Query 31314 TGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCG 31373
||||| |||||| | ||| ||| ||||||||||| || || |||| | ||||| ||
Sbjct 47477 CGTTGTCGGGCGCGACACGTACGGTGTGTTTCCGCTGCGCGGTAAGCTACTGAACGTGCG 47536
Query 31374 TGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCT 31433
||| || || || ||| || ||| |||| || || ||| |||| |||||| |
Sbjct 47537 TGAAGCGACCCACAAGCAGATTCTGGAGAATGCTGAAATTAACAATCTGATCAAGATCTT 47596
Query 31434 CGGGCTTCAG 31443
|| || |||
Sbjct 47597 GGGTCTCCAG 47606
>seq372
Length=50997
Score = 113 bits (124), Expect = 5e-20
Identities = 249/371 (67%), Gaps = 3/371 (1%)
Strand=Plus/Plus
Query 24744 GAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGA 24803
||| ||| ||||| ||| ||||| || ||| |||| ||||| || ||||| ||
Sbjct 39746 GAGCTGTACGGCAAAGTGGTCGAGACACCCCAGAACGAGAAAACTCCCTTCTATCCCCGC 39805
Query 24804 AGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCC 24863
||||||| | ||| ||| || |||||||| | || ||||| |||||
Sbjct 39806 TCGCCGTATGCATGTGCCAAGATGTACGGATACTGGATCGTGATCAATTACCGCGAGGCG 39865
Query 24864 CATGGGATATATGCATGCAACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCT 24923
| | || | ||| |||||||| ||||||||||||||||| ||| || || |||
Sbjct 39866 TACGATATGTTTGCCTGCAACGGGATTCTGTTCAACCATGAATCGCCCCGACGCGGAGAG 39925
Query 24924 GAATTTGTTACACGAAAGATTACTC--TTGGTATTGACCAT-TGGATCAAGACAAGGGCA 24980
| ||||| || || ||||| |||| | ||| || || | | || | || |
Sbjct 39926 AATTTTGTGACCCGTAAGATCACTCGTTCGGTCGCGAAGATATCGCTCGGGCAGCAGGAA 39985
Query 24981 CCTATTGAGCTGGGAAACCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTACGTC 25040
| |||||||| || || ||| |||| || || ||||| || || ||||| ||
Sbjct 39986 TGCGTCGAGCTGGGTAATCTCGATTCCAAGCGAGACTGGGGTCACGCGAAGGACTATGTG 40045
Query 25041 GACGCCATGTGGCGCATGCTCCAACAGAATAAGCCAGAGGATTTTGTGATCGGCACCGGT 25100
|| || ||||||| ||| | || ||| | || || || || ||||| || | ||||||
Sbjct 40046 GAGGCGATGTGGCTGATGATGCAGCAGGAGAAACCGGAAGACTTTGTCATTGCCACCGGC 40105
Query 25101 CAGACGCATTC 25111
|||| |||||
Sbjct 40106 GAGACACATTC 40116
>seq14
Length=264275
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 64774 ATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833
|| ||||||||||| ||||| ||||||||||| |||||| |||| || ||||||||||||
Sbjct 132391 ATCTTCTGGCTAAAGAAGCGTGGCCTGATGCCGGGTCTGACGTTCTCCAACGAGCTGATC 132332
Query 64834 TCTCGGGACGAGGG 64847
|| || || || ||
Sbjct 132331 TCGCGCGATGAAGG 132318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570294573886400
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