Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1066 123 2e-23 >seq1066 Length=67579 Score = 123 bits (136), Expect = 2e-23 Identities = 236/345 (68%), Gaps = 2/345 (1%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || || || || || ||||||| ||| || || |||||||| || ||||| || || Sbjct 15955 AGTCCCGTTACATGCGCGATCATGTGCGTTAGCAGCGAGTAGCTCGCAATGTTGAATGGC 16014 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || | ||| | || | || | ||||| | ||| ||||| ||||| |||| | | Sbjct 16015 ACGCCCAACCCTACATCGGCGGATCGTTGGTACATCTGGCACGACAGCTCACCGTTGGCC 16074 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 ||||||||||| || |||||| || ||||||||||| | | | ||| ||| Sbjct 16075 ACGTAAAACTGTACCAAACAGTGGCAAGGTGGAAGAGCCATAATGGGAATGTCCACCGGG 16134 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181 |||||||||| || |||||| || | ||| || |||||| | | ||| | | Sbjct 16135 TTCCAGGCGCTCAGGATGATCCGACGGTCGGTGGGATTGTTCTTCAGCTTGTCGATGATT 16194 Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTGTACTCTGC 30240 | |||||||||| ||| | || | ||| || | ||||| | |||| || Sbjct 16195 TCCGCCAGCTGATCCTTACCCTTGCCTGTGTAATCATCGTGGCATGTGC-CGTACGTGGC 16253 Query 30241 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30285 ||| || || | |||||||||||| || || || |||| ||| || Sbjct 16254 TCCAAAGTGACGCCACTGGAACCCATAAACTGGCCCCAAGTCACC 16298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406299406764240