Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq56 145 7e-30
seq122 143 2e-29
seq673 125 6e-24
seq966 113 4e-20
>seq56
Length=464437
Score = 145 bits (160), Expect = 7e-30
Identities = 195/269 (72%), Gaps = 2/269 (1%)
Strand=Plus/Plus
Query 135474 TGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCA 135533
|||||||| |||| || |||| | | |||||||| |||||||| ||| ||||||
Sbjct 139582 TGTGGAACTCGGCCCAGTTGCAGATGGTGAAGGAAGGCAAGATGCACGGGTTTTTGCGCA 139641
Query 135534 TGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACAC- 135592
|||| ||||| || ||||| | || ||| || ||| || | ||||||||| | | ||
Sbjct 139642 TGTACTGGGCCAAGAAGATCCTCGAGTGGACTAAATCACCCGAAGAGGCGCT-CGAGACT 139700
Query 135593 GCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGT 135652
|| || | | || ||| || || || ||||| |||||| | || || ||||| |||
Sbjct 139701 GCTATCTACCTCAACGATCGCTTCAACTTGGATGGGCGCGATCCGAACGGATACGTCGGT 139760
Query 135653 TGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGC 135712
|| |||||||| || || | || ||||| || ||||| ||||| | | ||||||
Sbjct 139761 TGCATGTGGTCGATCGCTGGCATCCATGATCAGGGTTGGAAAGAGCGTGAGATTTTTGGC 139820
Query 135713 AAGATTCGCTATATGAACTATGACGGTTG 135741
||||| ||||| ||||| ||||| || ||
Sbjct 139821 AAGATCCGCTACATGAATTATGAAGGCTG 139849
>seq122
Length=254344
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| |||||| | || ||||| || ||||| || ||
Sbjct 68678 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCG 68619
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| ||||| || || || ||||| || ||||| || || |||||
Sbjct 68618 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 68559
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||||||||| || |||||||| | ||| | ||||| || |||
Sbjct 68558 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAAC 68499
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | || ||||| | ||| |||| |||||
Sbjct 68498 ATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGTGG 68452
>seq673
Length=25255
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || ||||||||| | || || || || || || || ||
Sbjct 24639 ATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCATCG 24580
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || ||||| || || || || || |||||
Sbjct 24579 GACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAG 24520
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || |||| ||| | ||| |||| || ||||||
Sbjct 24519 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTACAAC 24460
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | ||| | || |||| | || |||||
Sbjct 24459 ATCCAGAAGGAGTCGACCCTGCATCTTGTGCTGCGACTTCGTGGTGG 24413
>seq966
Length=353950
Score = 113 bits (124), Expect = 4e-20
Identities = 160/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 26993 GATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTC 27052
||| || || || || ||||| || ||| | || ||||| || || || || ||||| |
Sbjct 1 GATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATAC 60
Query 27053 GATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCG 27112
|||||||| || || || ||||| || || |||||||| || || ||||| |||||
Sbjct 61 GATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCG 120
Query 27113 TTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCA 27172
| | || | ||| || || || |||| || || || | ||||| |||||||||||
Sbjct 121 TCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCA 180
Query 27173 AAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| | ||| |||| | ||| | || || || ||
Sbjct 181 GAAGGAATCGACTCTCCATCTGGTGCTCCGTCTTCGTGGAGGAAT 225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434906331014400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |