Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq56 145 7e-30 seq122 143 2e-29 seq673 125 6e-24 seq966 113 4e-20 >seq56 Length=464437 Score = 145 bits (160), Expect = 7e-30 Identities = 195/269 (72%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 135474 TGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCA 135533 |||||||| |||| || |||| | | |||||||| |||||||| ||| |||||| Sbjct 139582 TGTGGAACTCGGCCCAGTTGCAGATGGTGAAGGAAGGCAAGATGCACGGGTTTTTGCGCA 139641 Query 135534 TGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACAC- 135592 |||| ||||| || ||||| | || ||| || ||| || | ||||||||| | | || Sbjct 139642 TGTACTGGGCCAAGAAGATCCTCGAGTGGACTAAATCACCCGAAGAGGCGCT-CGAGACT 139700 Query 135593 GCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGT 135652 || || | | || ||| || || || ||||| |||||| | || || ||||| ||| Sbjct 139701 GCTATCTACCTCAACGATCGCTTCAACTTGGATGGGCGCGATCCGAACGGATACGTCGGT 139760 Query 135653 TGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGC 135712 || |||||||| || || | || ||||| || ||||| ||||| | | |||||| Sbjct 139761 TGCATGTGGTCGATCGCTGGCATCCATGATCAGGGTTGGAAAGAGCGTGAGATTTTTGGC 139820 Query 135713 AAGATTCGCTATATGAACTATGACGGTTG 135741 ||||| ||||| ||||| ||||| || || Sbjct 139821 AAGATCCGCTACATGAATTATGAAGGCTG 139849 >seq122 Length=254344 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| |||||| | || ||||| || ||||| || || Sbjct 68678 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCG 68619 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| ||||| || || || ||||| || ||||| || || ||||| Sbjct 68618 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 68559 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||||||||| || |||||||| | ||| | ||||| || ||| Sbjct 68558 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAAC 68499 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||||||| | || ||||| | ||| |||| ||||| Sbjct 68498 ATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGTGG 68452 >seq673 Length=25255 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || ||||||||| | || || || || || || || || Sbjct 24639 ATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCATCG 24580 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || ||||| || || || || || ||||| Sbjct 24579 GACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAG 24520 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| ||| | ||| |||| || |||||| Sbjct 24519 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGACTACAAC 24460 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||||||| | ||| | || |||| | || ||||| Sbjct 24459 ATCCAGAAGGAGTCGACCCTGCATCTTGTGCTGCGACTTCGTGGTGG 24413 >seq966 Length=353950 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 26993 GATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTC 27052 ||| || || || || ||||| || ||| | || ||||| || || || || ||||| | Sbjct 1 GATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATAC 60 Query 27053 GATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCG 27112 |||||||| || || || ||||| || || |||||||| || || ||||| ||||| Sbjct 61 GATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCG 120 Query 27113 TTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCA 27172 | | || | ||| || || || |||| || || || | ||||| ||||||||||| Sbjct 121 TCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCA 180 Query 27173 AAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| | ||| |||| | ||| | || || || || Sbjct 181 GAAGGAATCGACTCTCCATCTGGTGCTCCGTCTTCGTGGAGGAAT 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434906331014400