Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1066 143 2e-29
>seq1066
Length=67579
Score = 143 bits (158), Expect = 2e-29
Identities = 235/336 (70%), Gaps = 2/336 (1%)
Strand=Plus/Plus
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
||||| |||||||||| ||| ||||| | ||| || ||||||||||| ||||| || |||
Sbjct 15964 ACATGCGCGATCATGTGCGTTAGCAGCGAGTAGCTCGCAATGTTGAATGGCACGCCCAAC 16023
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736
|| | || | |||||||| || | |||||| |||||||| || || || ||||| ||
Sbjct 16024 CCTACATCGGCGGATCGTTGGTACATCTGGCACGACAGCTCACCGTTGGCCACGTAAAAC 16083
Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796
|| | |||||| || || || ||||| | || | ||| ||||||||| |||
Sbjct 16084 TGTACCAAACAGTGGCAAGGTGGAAGAGCCATAATGGGAATGTCCACCGGGTTCCAGGCG 16143
Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGC 6856
| || | ||||| | ||| || || ||||| ||||||| | | | ||||
Sbjct 16144 CTCAGGATGATCCGACGGTCGGTGGGATTGTTCTTCAGCTTGTCGATGATTTCCGCCAGC 16203
Query 6857 TGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGC-TCCCCCGATACTCCGCCCCAAAGTG 6915
|| ||| |||| || | || || | | || | ||| ||| || ||||||||
Sbjct 16204 TGATCCTTACCCTTGCCTGTGTAATCATCGTGGCATGTGCCG-TACGTGGCTCCAAAGTG 16262
Query 6916 TCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951
| |||||||||||| || || || |||||||| ||
Sbjct 16263 ACGCCACTGGAACCCATAAACTGGCCCCAAGTCACC 16298
Score = 143 bits (158), Expect = 2e-29
Identities = 235/336 (70%), Gaps = 2/336 (1%)
Strand=Plus/Minus
Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453
|| |||||||| || || || |||||||||||| | |||||||| || ||| |||
Sbjct 16298 GGTGACTTGGGGCCAGTTTATGGGTTCCAGTGGCGTCACTTTGGAGCCACGTA-CGGCAC 16240
Query 34454 A-GCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTT 34512
| || | | || || | || |||| ||| |||||| | | | ||||||| |
Sbjct 16239 ATGCCACGATGATTACACAGGCAAGGGTAAGGATCAGCTGGCGGAAATCATCGACAAGCT 16180
Query 34513 GAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCC 34572
|||| || || ||| | ||||| | || |||| ||||||||| ||| | ||
Sbjct 16179 GAAGAACAATCCCACCGACCGTCGGATCATCCTGAGCGCCTGGAACCCGGTGGACATTCC 16120
Query 34573 TCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCT 34632
| ||||| || || || |||||| | || || ||||| || || || |||||
Sbjct 16119 CATTATGGCTCTTCCACCTTGCCACTGTTTGGTACAGTTTTACGTGGCCAACGGTGAGCT 16060
Query 34633 GTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGC 34692
||| |||||| | || |||||||| | || | ||||| || ||||| |||||||||||
Sbjct 16059 GTCGTGCCAGATGTACCAACGATCCGCCGATGTAGGGTTGGGCGTGCCATTCAACATTGC 16000
Query 34693 TAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728
|| ||| | ||||| ||| |||||||||| |||||
Sbjct 15999 GAGCTACTCGCTGCTAACGCACATGATCGCGCATGT 15964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448249960718400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |