Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1066 143 2e-29 >seq1066 Length=67579 Score = 143 bits (158), Expect = 2e-29 Identities = 235/336 (70%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||| |||||||||| ||| ||||| | ||| || ||||||||||| ||||| || ||| Sbjct 15964 ACATGCGCGATCATGTGCGTTAGCAGCGAGTAGCTCGCAATGTTGAATGGCACGCCCAAC 16023 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 || | || | |||||||| || | |||||| |||||||| || || || ||||| || Sbjct 16024 CCTACATCGGCGGATCGTTGGTACATCTGGCACGACAGCTCACCGTTGGCCACGTAAAAC 16083 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || | |||||| || || || ||||| | || | ||| ||||||||| ||| Sbjct 16084 TGTACCAAACAGTGGCAAGGTGGAAGAGCCATAATGGGAATGTCCACCGGGTTCCAGGCG 16143 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGC 6856 | || | ||||| | ||| || || ||||| ||||||| | | | |||| Sbjct 16144 CTCAGGATGATCCGACGGTCGGTGGGATTGTTCTTCAGCTTGTCGATGATTTCCGCCAGC 16203 Query 6857 TGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGC-TCCCCCGATACTCCGCCCCAAAGTG 6915 || ||| |||| || | || || | | || | ||| ||| || |||||||| Sbjct 16204 TGATCCTTACCCTTGCCTGTGTAATCATCGTGGCATGTGCCG-TACGTGGCTCCAAAGTG 16262 Query 6916 TCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 | |||||||||||| || || || |||||||| || Sbjct 16263 ACGCCACTGGAACCCATAAACTGGCCCCAAGTCACC 16298 Score = 143 bits (158), Expect = 2e-29 Identities = 235/336 (70%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || |||||||| || || || |||||||||||| | |||||||| || ||| ||| Sbjct 16298 GGTGACTTGGGGCCAGTTTATGGGTTCCAGTGGCGTCACTTTGGAGCCACGTA-CGGCAC 16240 Query 34454 A-GCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTT 34512 | || | | || || | || |||| ||| |||||| | | | ||||||| | Sbjct 16239 ATGCCACGATGATTACACAGGCAAGGGTAAGGATCAGCTGGCGGAAATCATCGACAAGCT 16180 Query 34513 GAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCC 34572 |||| || || ||| | ||||| | || |||| ||||||||| ||| | || Sbjct 16179 GAAGAACAATCCCACCGACCGTCGGATCATCCTGAGCGCCTGGAACCCGGTGGACATTCC 16120 Query 34573 TCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCT 34632 | ||||| || || || |||||| | || || ||||| || || || ||||| Sbjct 16119 CATTATGGCTCTTCCACCTTGCCACTGTTTGGTACAGTTTTACGTGGCCAACGGTGAGCT 16060 Query 34633 GTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGC 34692 ||| |||||| | || |||||||| | || | ||||| || ||||| ||||||||||| Sbjct 16059 GTCGTGCCAGATGTACCAACGATCCGCCGATGTAGGGTTGGGCGTGCCATTCAACATTGC 16000 Query 34693 TAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 || ||| | ||||| ||| |||||||||| ||||| Sbjct 15999 GAGCTACTCGCTGCTAACGCACATGATCGCGCATGT 15964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448249960718400