Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq673 105 5e-18 seq111 102 6e-17 seq122 89.7 3e-13 seq610 87.8 1e-12 seq966 86.0 4e-12 >seq673 Length=25255 Score = 105 bits (116), Expect = 5e-18 Identities = 148/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| ||||| ||||| || || || ||||| ||||| || || | Sbjct 24642 AAAATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCA 24583 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| | || ||| | || | || || ||||| || || | || ||||| Sbjct 24582 TCGGACACCATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGAATCCCCCCAGA 24524 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGAT 23784 ||| |||||| | || || |||||||| || ||||| |||| || | |||| | || Sbjct 24523 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCG--GAC 24466 Query 23785 TACAACATACAAAAAGAGTCCAC 23807 |||||||| || || ||||| || Sbjct 24465 TACAACATCCAGAAGGAGTCGAC 24443 >seq111 Length=461598 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||||||||| || || ||||| || || || || || || Sbjct 359878 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCG 359819 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | || || ||||| || || | ||||| ||||| Sbjct 359818 GATACGATCGAGAATGTGAAGGC-CAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCA 359760 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || ||||| || |||||||||| ||| ||| | ||| ||||| Sbjct 359759 GCAGCGTCTTATCTTCGCTGGCAAGCAGCTGGAAGACGGACGTACTCTGTCCGACTACAA 359700 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 359699 TATTCAGAAGGAATCGAC 359682 >seq122 Length=254344 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || || ||||||||||| || || || | || Sbjct 68678 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCG 68619 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | || || || ||||| || || | || |||||||| Sbjct 68618 GATACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 68559 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || || |||||||| || |||||||||| ||| || | ||| || ||| Sbjct 68558 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAAC 68499 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 68498 ATCCAGAAGGAGTCGAC 68482 >seq610 Length=159711 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || ||||| || ||||| || |||||||| || || || | | Sbjct 159344 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATC 159403 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| | | || || ||| || || ||||| | || |||||||| Sbjct 159404 CGATACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCA 159463 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || ||||| || | || ||| | ||| ||||| Sbjct 159464 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAA 159523 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || || || Sbjct 159524 CATCCAGAAGGAATCGAC 159541 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||| || ||||| || |||||||| || || || | Sbjct 159114 AATATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCA 159173 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || |||| | | || || ||| || || ||||| | || |||||| Sbjct 159174 TCCGATACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGAT 159233 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | || || || || || || ||||| || | || ||| | ||| ||| Sbjct 159234 CAGCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTAC 159293 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || || || || Sbjct 159294 AACATCCAGAAGGAATCGAC 159313 >seq966 Length=353950 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || ||||| || ||||| || ||||| || || || || | | Sbjct 223 AATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACCCTGGAGGTCGAGCCATC 282 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| | | || || ||| || || ||||| | || |||||||| Sbjct 283 CGATACAATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATTCCTCCAGATCA 342 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || ||||| || | || || | ||| ||||| Sbjct 343 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACGCTGTCCGACTACAA 402 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| || || || | ||| |||| Sbjct 403 CATCCAAAAGGAATCGACTCTCCATCTAGT 432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338000454727760