Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq111 149 1e-30 seq966 132 1e-25 seq610 132 1e-25 seq673 131 4e-25 seq122 122 2e-22 >seq111 Length=461598 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || || || || || ||||| || || | |||||| |||| || ||| Sbjct 359657 ACGCAGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGACAGAGT 359716 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| |||||||||||||| || || || || |||||||| || Sbjct 359717 ACGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCC 359776 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||| || || |||| || || || | Sbjct 359777 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAG 359836 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| ||||| | ||||| | ||| | ||||| Sbjct 359837 GGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878 >seq966 Length=353950 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || || |||||||| ||||| ||||||| ||||| |||| || || Sbjct 445 ACGAAGACGGAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGT 386 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||||||||| || || || || || ||||| || Sbjct 385 ACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCC 326 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || ||||| |||||| || || || || || | || || || | Sbjct 325 TTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGACCTCCAG 266 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| || |||| || || | ||| | |||||| Sbjct 265 GGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 223 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || || |||||||| ||||| || || | ||||| |||| || ||| Sbjct 217 ACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGAGT 158 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||||||||| || || || || || || || || Sbjct 157 ACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCC 98 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || ||||| |||||| || || || || || | || || || | Sbjct 97 TTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAG 38 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| ||||| || |||| || || | ||| Sbjct 37 AGTGATGGTCTTTCCTGTCAGGGTCTTCACGAA 5 >seq610 Length=159711 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||| || || |||||||| ||||| || |||| ||||| |||| || ||| Sbjct 159566 ACGAAGACGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGT 159507 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||||||||| || || || || || || || || Sbjct 159506 ACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCC 159447 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || ||||| |||||| || || || || || | || || || | Sbjct 159446 TTCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAG 159387 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| || |||| || || | ||| | |||||| Sbjct 159386 AGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 159344 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || |||||||| ||||| || |||| ||||| |||| || ||| | ||||| Sbjct 159328 AGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 159269 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||||||||| || || || || || || || |||||||| || Sbjct 159268 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTATCC 159209 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| || || || || || | || || || | ||||| ||| Sbjct 159208 TGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGGTC 159149 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || |||| || || | ||| | ||||| || Sbjct 159148 TTTCCTGTCAGGGTCTTCACGAAAATCTGCATATT 159114 >seq673 Length=25255 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| ||| ||||| || || || || || || |||| ||||| || | | || Sbjct 24418 ACGAAGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 24477 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || || || || || || || Sbjct 24478 ACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCC 24537 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||||||||| || | || || || | Sbjct 24538 CTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAG 24597 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || | ||||| | ||| | |||||||| Sbjct 24598 TGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTT 24642 >seq122 Length=254344 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || || || || || |||| || || |||| || || | || ||| Sbjct 68467 AGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGTCCGTCT 68526 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || || || || || ||||| || |||||||| Sbjct 68527 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 68586 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || || | ||||| || | ||||||||| Sbjct 68587 TGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGTC 68646 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 68647 TTGCCAGTCAACGTCTTCACGAAGATCTGCAT 68678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192497279940680