Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1066 109 4e-19 >seq1066 Length=67579 Score = 109 bits (120), Expect = 4e-19 Identities = 234/346 (68%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || || || || || ||||||| ||| || || |||||||| || ||||| || || Sbjct 15955 AGTCCCGTTACATGCGCGATCATGTGCGTTAGCAGCGAGTAGCTCGCAATGTTGAATGGC 16014 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || | ||| | || | || | ||||| | ||| ||||| ||||| || | | Sbjct 16015 ACGCCCAACCCTACATCGGCGGATCGTTGGTACATCTGGCACGACAGCTCACCGTTGGCC 16074 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 27387 ||||||||||| | |||||| || ||||||||||| | | | ||| ||| Sbjct 16075 ACGTAAAACTGTACCAAACAGTGGCAAGGTGGAAGAGCCATAATGGGAATGTCCACCGGG 16134 Query 27388 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 27447 |||||||||| || |||||| || | ||| || |||||| | | ||| | | Sbjct 16135 TTCCAGGCGCTCAGGATGATCCGACGGTCGGTGGGATTGTTCTTCAGCTTGTCGATGATT 16194 Query 27448 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCT--CATGTCCGTGTACTCTG 27505 | |||||||||| ||| | || | ||| || | | | ||||| | |||| | Sbjct 16195 TCCGCCAGCTGATCCTTACCCTTGCCTGTGTAATC-ATCGTGGCATGTGC-CGTACGTGG 16252 Query 27506 CTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 |||| || || | ||| |||||||| || || || |||| ||| || Sbjct 16253 CTCCAAAGTGACGCCACTGGAACCCATAAACTGGCCCCAAGTCACC 16298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369497202520820