Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1047 486 3e-132 >seq1047 Length=31309 Score = 486 bits (538), Expect = 3e-132 Identities = 1246/1886 (66%), Gaps = 36/1886 (2%) Strand=Plus/Plus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 || || | ||| |||||||| | | | || ||||| ||||||| ||| ||||| || Sbjct 16730 TTGTCAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCG 16789 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 ||||| || |||| |||| ||||||||||| || ||| ||||| || | || Sbjct 16790 GTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGC 16849 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || |||| |||||||| | ||||| ||| || ||||| ||||||| || |||||| Sbjct 16850 TCAGCTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCC 16909 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 ||||| || || || || ||| ||||| | |||||| | | | ||| | Sbjct 16910 ATTTTGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGATGTGT 16969 Query 77013 TCTGGAAGGTT---TGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069 | |||| | | | ||||| || || ||| | | | ||| | ||||| || Sbjct 16970 TGCGGAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCATT 17029 Query 77070 TCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGA 77129 ||||| | ||||| || | || |||| | || | || | |||| |||| |||| |||| Sbjct 17030 TCATCGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTGA 17089 Query 77130 AATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 77189 || || ||||| | ||| |||||| |||| | ||| || |||||||| | |||||| Sbjct 17090 AACTCGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTCG 17149 Query 77190 TTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTT 77249 ||||| || | ||||| ||||| || || || |||||||| || | | | ||| Sbjct 17150 TTGTTACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATTG 17209 Query 77250 CTGAGACCATGTGTTCTGATTTTATCTTTTA-GATATTTCCAATCCCAAAGATCTGAAGG 77308 | | |||||||| || || ||||||| | | ||||||||| | || | ||| Sbjct 17210 CGCACGCCATGTGTCACAATATT-TCTTTTAAGCTCAGCCCAATCCCACAATTCCGTAGG 17268 Query 77309 -TACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATG 77367 | | | ||||| | ||||| || || ||||| || ||| | ||||| ||||| Sbjct 17269 CTTCTTC-TCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATATG 17327 Query 77368 TTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427 ||| || || || || | | || | ||| || |||||||| | |||||| | |||| Sbjct 17328 ATTCGTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAA 17387 Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487 | ||||| || || | | ||| | || ||||| ||| || | || | | | Sbjct 17388 TGGTTTCAAACATTTGTTGATTCAACAGCTGGGCTTCTTCACTTTCGTAAGGGTGGCGCA 17447 Query 77488 AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 77547 | || || |||||||| | || || ||||| || || || || | || | | ||| Sbjct 17448 TCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATAT 17507 Query 77548 TGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTC 77607 |||| || ||||| |||| |||||||||||| || || || ||||| || ||||| Sbjct 17508 TGGATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATTCT 17567 Query 77608 TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC---TATAA 77664 || ||| ||| | || |||||||| || |||||| || | | ||| | | | Sbjct 17568 TAGTAACAGTTTTGGCTACTTCCTTTAGCTTTGCGAAATCATATGTACGATCGGGTTTCA 17627 Query 77665 CAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA- 77723 |||||||||| || || || || || || ||||| || || | |||| | || | | Sbjct 17628 CAAACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTTTTGAAG 17684 Query 77724 --TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGT 77781 |||| || || ||||| || || || ||| ||||| || || | |||||| |||| Sbjct 17685 AGTATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGT 17744 Query 77782 TGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTG 77841 | ||||| |||||| | || || ||||| || | || || ||||||| ||||| Sbjct 17745 TACTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTG 17804 Query 77842 ATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTC 77901 |||| ||||| | ||| | || || |||| | || | || | ||| | Sbjct 17805 ATTCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGACCCTCGC 17864 Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 || || ||| || || ||| || || || ||||| || ||||||||| | Sbjct 17865 GCTCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAGGAC 17924 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT------AACTCGTTTCATAA 78015 | || | |||||||| | ||| || ||| ||| || || || | ||| | Sbjct 17925 AGTCGTGAGGGCACATTA--GAC---TCCACAT-TTCGTTGGCTTCCACACGCTGCATGA 17978 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTG 78075 | | |||||| ||||| || || || | || | | | ||||| || || | Sbjct 17979 ACAAATCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAG 18038 Query 78076 TATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTG 78135 | |||||||| ||||| | |||||| | | ||| ||||||||| || ||||| || | Sbjct 18039 TGTTCTTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAG 18098 Query 78136 CCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAA 78195 | | |||| ||||| || |||||||| || || | ||| | || || ||||| || | Sbjct 18099 CAAAGGCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGA 18158 Query 78196 CTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCAC 78255 | | || ||| || | | |||||| || | ||||| ||||| | |||||| |||| Sbjct 18159 CGCGCAGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTT 18218 Query 78256 TTGCGCGAATATTACTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGA 78311 | || | ||| | || | || ||||| || || ||| ||||| || | Sbjct 18219 TCGCCCTAAT----GCAGTGTACATTCAGGCCTATGCCACCAGCCGATTTAGAGATCAAG 18274 Query 78312 GCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGA 78371 || || |||| | |||||||| || ||||| || || || ||| ||| | || || Sbjct 18275 GCACACTGTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGG 18334 Query 78372 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431 || ||| |||| ||| | | |||| ||||| ||| | || || || || ||| Sbjct 18335 AAGCAGGACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGC 18394 Query 78432 GTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGA 78491 ||||| || || || || | |||||| || || || || || || || || | Sbjct 18395 GTAAAGTATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCA 18454 Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551 || || || | || |||||||| | ||| || || || || || || |||| || Sbjct 18455 TGTATGCCGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTA 18514 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 78611 ||||| |||| |||||| ||||||| ||||| |||||||| || ||||| |||||| Sbjct 18515 ATTTTTAACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCA 18574 Query 78612 CTCTCGTAAATAATAACAGAATTTAG 78637 | ||||| || || ||||||| || Sbjct 18575 CGGTCGTAGATGATCGCAGAATTAAG 18600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694649522940800