Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1047 477 1e-129 >seq1047 Length=31309 Score = 477 bits (528), Expect = 1e-129 Identities = 1245/1879 (66%), Gaps = 31/1879 (2%) Strand=Plus/Plus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| ||||||||||| | | |||||||| ||||||| ||| ||||| || |||| Sbjct 16734 CAACTGTGAACTGAATCGCATTAACAGCTGGTTTGGTACGTAAATAATACATCCCGGTTT 16793 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | || |||| |||| ||||||||||| || ||||||||| || | || || | Sbjct 16794 TAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCAG 16853 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 ||| |||||||| | ||||| ||| || ||||| ||||||| || |||||||||| Sbjct 16854 CTACGTGAATATTGAAAGACTGCGATTGGTCAATGAATGCTCCTCGGTCGGCCGCCATTT 16913 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | || || || || ||| ||||| | |||||| | | | ||| | | | Sbjct 16914 TGATGCAAGTTTTCACAGAAATCTCCCAGACCGTTTTGTACAGATTGCGGATGTGTTGCG 16973 Query 75612 GAAGATT---TGTATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 ||| | | | ||||| || || || | | | ||| | ||||| || |||| Sbjct 16974 GAATTTCCTCTATCTTTTGTATTGAGCCATTTTGGGCCAGAATCTTGTTCTTCATTTCAT 17033 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | | ||||| || || |||| | || | || | |||| |||| || | |||||| | Sbjct 17034 CGTCCCACAGTTCCAATTCAGTTAGATCTTTTAGCAAATGATGATTCACTACTTGAAACT 17093 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 | ||||| | ||| || ||| |||| | ||| || |||||||| | |||||| |||| Sbjct 17094 CGCCAGAAAGTACCCTACGATTGTAGACATTTGAAGTGTATGGTTCAAAAGATTCGTTGT 17153 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 | || | ||||| ||||| || || ||||||||||| || | | | ||| | | Sbjct 17154 TACCGAGTATTTGCGCAGTCGACGCGGTCGGCATAGGCGCTAAAAGCAGGGAATTGCGCA 17213 Query 75849 GACCATGTGTTCTGATTTTATCTTTT-AGATATTTCCAATCCCAAAGATCTG-ATGGTAC 75906 ||||||| || | | | |||||| || | ||||||||| | || | | | | | Sbjct 17214 CGCCATGTG-TCACAATATTTCTTTTAAGCTCAGCCCAATCCCACAATTCCGTAGGCTTC 17272 Query 75907 AACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTC 75966 | ||||| | ||||| || || ||||| |||||| | ||||| ||||| ||| Sbjct 17273 TTC-TCCCACATGTCGTACTGAAGGATTCCTTTGCTAACTGGACTTCCATCATATGATTC 17331 Query 75967 GTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGT 76026 ||| | || |||| | | || | |||||| ||||| || | || ||| | ||||| || Sbjct 17332 GTATGGACCATCCTGTGCGGCCAATTCGCAGCTCGCTTCAAGGGCTCCGAAGTAAATGGT 17391 Query 76027 TTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAA 76085 ||| || || | | ||| || | | || ||||| ||| || |||| | | | | Sbjct 17392 TTCAAACATTTGTTGATTCAACAGC-TGGGCTTCTTCACTTTCGTAAGGGTGGCGCATCA 17450 Query 76086 GAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGG 76145 || || |||||||| | || || ||||| || || || || | || | | |||||| Sbjct 17451 AGATGAAAGCATCTGCCATGCCTTGCACTCCGATCCCTATCGGACGGTGGCGCATATTGG 17510 Query 76146 AAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGA 76205 | | ||||| |||| ||| |||||||| ||||| || ||||| || ||||| | Sbjct 17511 ATCGCTTTGCTTCCGGAACAGGATAATAATTTATATCGATGATTTTGTTAAGATTCTTAG 17570 Query 76206 CAACTACTTTAACCACGTCCTTTAG-TTTGAGAAAATCAAATTTTCCATC---TATCACA 76261 ||| ||| | || |||||||| |||| | |||||| || | | ||| | ||||| Sbjct 17571 TAACAGTTTTGGCTACTTCCTTTAGCTTTGCG-AAATCATATGTACGATCGGGTTTCACA 17629 Query 76262 AACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA--- 76318 ||||| || | || || || || || ||||| || || | |||| | || | | Sbjct 17630 AACATGTTTAAGGCAATCGAGGCCAGGTTACACACAGCAATTTCAT---CTTTTGAAGAG 17686 Query 76319 TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTG 76378 |||| || || || ||||| || || ||||||||| ||||| | |||||| ||||| Sbjct 17687 TATTCTACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCGATATTTTGCTGGTTA 17746 Query 76379 CTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGAT 76438 ||||| || || | || || ||||| | | || ||||||||||| ||||||| Sbjct 17747 CTCTTACGATTGCACGCATCTTTGTAAAGCATGTAAGGCACTCCAGTTTCAACCTGTGAT 17806 Query 76439 TCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTT 76498 || ||||| | ||| | || || |||| | | || | || ||| | Sbjct 17807 TCTATAATTGCGAACCATAAATCTTGTGCCTTTACTTGACGGGTGAAACGACCCTCGCGC 17866 Query 76499 TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACAT 76558 || || || || | ||| || || || ||||| || ||| |||||||| Sbjct 17867 TCGTAGCCAGTGTAGAGTTTTTCGAACTCCTCACCCCATGTCTCCGACAATCCAGGACAG 17926 Query 76559 TCATTCGGACACATCAATGACCAC---TCACCATCTTCCTTAACCCGTTTCATAAAGAGA 76615 || | || ||||| | |||| || ||||| || || | ||| || | | Sbjct 17927 TCGTGAGGGCACATTAGACTCCACATTTCGTTGGCTTCC---ACACGCTGCATGAACAAA 17983 Query 76616 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTC 76675 ||||| ||||| || || || | || | | | ||||| || || || ||| Sbjct 17984 TCAGGAATCCACAGCGCGTAGAACATGTCCCTTGCGCGGACCTCTTCTTTGCCAGTGTTC 18043 Query 76676 TTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATA 76735 ||||| ||||| | ||||| | | ||| ||||||||| || ||||| || || | Sbjct 18044 TTTTTTAGATCCAAAAACTCAAATACATCCCCATGCCATGGCTCCAGATAGATAGCAAAG 18103 Query 76736 ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTC 76795 | || ||||| || |||||||| || || | ||| | ||||| ||||| || || | | Sbjct 18104 GCTCCGGGTCGCTTGTTACCTCCTTGGTCAACATAACGTGCAGTATTATTGTAGACGCGC 18163 Query 76796 AACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCA 76855 | ||| || | | ||||| || ||||||| ||||| | |||||| |||| || Sbjct 18164 AGCATCGGTACTAAACCGTTCGAAATACCATTCGTTCCTGCAATATATGTTCCTTTCGCC 18223 Query 76856 CGAATATTACTAATAGAT--AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913 | ||| | | || || |||||||| || || ||| ||||||||| | ||||| Sbjct 18224 CTAAT-GCAGT-GTACATTCAGGCCTATGCCACCAGCCGATTTAGAGATCAAGGCACACT 18281 Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973 |||| | || || || || ||||| || ||||| ||| ||| | || || || ||| Sbjct 18282 GTTTAAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTGAGCAGGAAGCAGG 18341 Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033 |||| ||| | | |||| ||||| ||||| || || || || || || || Sbjct 18342 ACGACAGTTGCGGCCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAAGCGTGCGTAAAGT 18401 Query 77034 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTC 77093 || || || || | |||||| || || || | | || ||||| ||| || | Sbjct 18402 ATCGCTCTGACAGCAAATTGTACGTCTCGATGGCAGAATCAATATCTTCACCATGTATGC 18461 Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCA 77153 | | ||| |||||||| | ||| || || || | || ||| |||| || ||||| | Sbjct 18462 CGATAGCAACACGCATGAGCATGTGTTGCGGCCTCTCCACAATCTTCCCCTTAATTTTTA 18521 Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGT 77213 ||| |||||| ||||||| ||||| |||||||| || ||||| |||||| | |||| Sbjct 18522 ACAGATATGATCTTTCCAATGTTTTGAAACCAAAGTAATTGTAACCAAAGTCACGGTCGT 18581 Query 77214 AAATAATAACCGAATTTAG 77232 | || || | ||||| || Sbjct 18582 AGATGATCGCAGAATTAAG 18600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712914616070400