Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq730 152 3e-32 >seq730 Length=89331 Score = 152 bits (168), Expect = 3e-32 Identities = 392/588 (67%), Gaps = 18/588 (3%) Strand=Plus/Minus Query 72191 AGTTTATGGTGTGTATCGTAGAAATAGCCGCTTGGGCGTGTAGGCTGTGACAGCAATAAG 72250 || || |||||||| |||||||| ||||| ||| |||||||| ||||||| || Sbjct 33059 AGCTTGTGGTGTGTGTCGTAGAAGTAGCCAGAGTTGCGAGTAGGCTGGGACAGCAGCAAC 33000 Query 72251 ATGCGGTTATCCTGTCCG-GTAAGAGCACCGGTGATGATACCGAAAGCTCTATCACTGAC 72309 || ||||| || | | | || || || |||| || | || || ||| | || || Sbjct 32999 ATCCGGTTGTCG-GCCTGAGTCAGCGCCCCGGACATCACGCCAAAGGCTTTGTCTGATAC 32941 Query 72310 ACCGGAGGCTTCATCGATAATATACAGAAGATGATCTGCGTGTTCACCGGCGAGAGCTTC 72369 ||||| || ||||| | || || | | || ||||| ||||| ||||||| ||| Sbjct 32940 GCCGGACGCCTCATCCACGATGTAGAACATGTGGAGGGCGTGCTCACCAGCGAGAGATTC 32881 Query 72370 TTCACTTCCCAGACGAAAGCCCTTCGGTACTACAGTCCATACACCTTTACCAGTAATCTC 72429 ||| | || | || | ||||| || || ||| ||||| || | ||| Sbjct 32880 CTCATTGCCTATCCGGCAACCCTTGGGGCTCACGAACCAGACACCCTTGTGTGCCCGCTC 32821 Query 72430 ATAGAAAGCGGTTTCTGTCAGAACAAAATAATCAGCAAGCCATGGGAAACGGCTGG---- 72485 | |||| | |||||| ||||| || ||||| | | | ||| ||| |||||| Sbjct 32820 AAAGAACGTGGTTTCGGTCAGGACGAAATACTGCTCTATCCAAGGGTGGCGGCTGCACAT 32761 Query 72486 -TGGCAGTAGCCCAGTTTATCTTGATGTACTTGAATAT-ACCGGTCATTACCTGCTGAAT 72543 | || |||| || ||||||| |||||| | | ||| | | |||||| || Sbjct 32760 CTCGCGGTAG-----TTGATCTTGAGGTACTTCCACACCACCTG-CTGCACCTGCGCGAT 32707 Query 72544 TTTGTTCGCAACGATAATGGCACGGGCACCTGGATACATGATTATGAACAACATGATCAT 72603 |||||||| || | || ||||||| || || | || ||| | | || |||||| Sbjct 32706 CTTGTTCGCCACAACAACCACACGGGCCCCGGGGAAGCAGAGCATGTAGATCAGGATCAT 32647 Query 72604 GATAGAAGTCATGTCTGATTTCCCGGTACCGTGACCAGACGAAACAGATGTCTTGCTAC- 72662 ||| || |||||||| || || || |||||||||||||| | ||| || ||| | | || Sbjct 32646 GATGGAGGTCATGTCGGACTTACCCGTACCGTGACCAGATGCAACGGAAGTCCT-CGACT 32588 Query 72663 -CCTGTTCCTGCACAGACTCAATAATCAGATCCTGCTGCCAGGTAGGTGTTTTGCCGAAC 72721 | | | | || ||||| || | ||| | ||||||||| || || ||||||| ||| Sbjct 32587 TCGTTTGCATG-ACAGAATCCAGAATGATGCACTGCTGCCAAGTCGGCTTTTTGCCAAAC 32529 Query 72722 AAAACATCAGCGGCAGCAATCCAGTCATAACGATATAGCGCCACCAGC 72769 | | ||| ||| ||||||||||| ||||| ||||||||| Sbjct 32528 AGCTCGACAGAGGCTCTTATCCAGTCATAGCGATACTTGGCCACCAGC 32481 Score = 150 bits (166), Expect = 1e-31 Identities = 199/271 (73%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 53254 GCTGCCGACTTCCAGGAGGGACGGACTCCG-ATCATCATCTGCAACAAAAAGGCAGAGGT 53312 || |||| || | | || || || | |||| || | ||||||||||| ||||| ||||| Sbjct 5452 GCCGCCGCCTACAACGAAGGGCG-ATTCCGCATTCTGATCTGCAACAAGAAGGCCGAGGT 5394 Query 53313 GGGTATCAACCTGCATCGAGGAACGACTGACATCCATCATCTGACGTAGCCATGGACACC 53372 |||| | |||||||| | |||||||| ||||||||||| ||||| ||| |||||||| Sbjct 5393 GGGTGTAAACCTGCACCATGGAACGACCGACATCCATCACCTGACCCTGCCGTGGACACC 5334 Query 53373 AGCCAGTATCGCACAGCGTAACGGTCGCGGTGCCCGAGTTGGCTCC-AACCGTGCAAGCG 53431 ||||| || || || || || || || || || || || || | | |||| | Sbjct 5333 CGCCAGCATTAAGCAACGGAATGGCCGTGGAGCTCGCGTAGGGGCCTCGCAGAGCAA-AG 5275 Query 53432 TTCGCGTTCACTACTACTGCGGCAAGGGTTCTTTCGATGAATACCGACTGAAGACGCTGA 53491 |||| |||||||||||| |||||||| ||||||||||| |||| ||| ||||| | Sbjct 5274 TTCGAGTTCACTACTACATGGGCAAGGGCTCTTTCGATGAGCACCGCCTGTCAACGCTCA 5215 Query 53492 AGCGTAAAGCAGGCTGGATCTCCGATATCCT 53522 |||| || || | ||| | ||| ||||| Sbjct 5214 AGCGCAAGGCCGAGTGGCAGTTCGAGATCCT 5184 Score = 140 bits (154), Expect = 2e-28 Identities = 559/860 (65%), Gaps = 35/860 (4%) Strand=Plus/Plus Query 39672 GTGGTGACAGCGAAGGGAGACGAGGTAAAAACGGCGTTTGATATCGTCGATGCCTCAGCT 39731 || || || ||||| || || ||||| ||||| || || | | || || ||| | Sbjct 87293 GTAGTCACGGCGAAAGGGGATGAGGTGAAAACCGCCTTCGTGGTGGTTGAGGCCAGTTCG 87352 Query 39732 CTTTTGGTATCCAATACTCTGGATGGGAAAATTAATCCAGACTATCCCCAGGAACTTCAG 39791 || | ||||| || ||| || | || ||| | |||||||| || || || ||| Sbjct 87353 CTGATCCCCTCCAACGATCAGGACGGCAGGATCAATACCGACTATCCGCAAGAGCTGCAG 87412 Query 39792 CCGCGCGACCGGACCCGCGCATCCAGCCTTCTTCAGGTCAACCAGATATCCAAGGATTTG 39851 || || || || ||||| |||| | | || ||| || | | || ||| || | ||| Sbjct 87413 CCCCGGGATCGCACCCGTAAATCCTCCATCCTGCAGATCGCCAAAATGTCCCAGAACTTG 87472 Query 39852 CGTCCTGCCCAGCTTACCGATTCCGGTTTATCCAGCCATGGCGCGCCGATAATTGGTGAG 39911 ||||| |||||||| | ||||| || | ||||| |||||||||||||| | || Sbjct 87473 CGTCCGGCCCAGCTGGCGGATTCGGGGCTTTCCAGTCATGGCGCGCCGATTGTCGGCCCT 87532 Query 39912 GACAATGCCGTTGAGTCAGGTAATGGGCGGACCATGGGGATCATCAAAGCCTAT-CAGGA 39970 || | || ||||||||||| || || || ||| |||||| |||||| |||| Sbjct 87533 GATCTGGTGGTGGAGTCAGGTAACGGTCGAACAATGTCTATCATCCGGGCCTATGCAGG- 87591 Query 39971 CGGCAATGCGGATCGGTATCGTGAGTACCTGATTGAACATGCGACCGAATTCGGCATACG 40030 || | ||| || | ||| || | ||||||| | || |||| | | |||| Sbjct 87592 TGGTACTGCAGACCAGTACCGGGCGTACCTGCTCGACAATGCCA-------AGCTGTACG 87644 Query 40031 ACCTGAA-AAGG--TTGAATCA----ATGACGGCTCCGGTACTGGTGCGCCGCCGGTTAA 40083 |||||| |||| || ||| ||| || || | |||| | || | Sbjct 87645 GCCTGAACAAGGGCCAGATTCAGGGTATGCGGGAGCCTATCATGGTCAGGGTTCGCCTCG 87704 Query 40084 CTAAGGTTGACCGCGTTCAGTTTGCCAAGGACTCAAATATTTCTGATCTTCAGGAAATGG 40143 | ||||| |||||| ||||| |||| ||||| ||||| ||||| || |||| |||| Sbjct 87705 ATGAGGTTAACCGCGCCCAGTTCGCCAGAGACTCCAATATCTCTGACCTGCAGGGGATGG 87764 Query 40144 CAGCCAGTGAAAAGGCTTTTGTTGATGCCGACAGCATA-ACACCGGCGATGATGGCGCTT 40202 | | | || | || || || ||||| ||| || | ||||||||| ||| Sbjct 87765 CTCCGACAGAGATCGCCCGGGTAGACGCCGAGGAGATAGACGAC-AAGATGATGGCCCTT 87823 Query 40203 TT-TAACCCGTCAGAAAGCGGAGATCTGCTTAGCCG-CAGTAATGACGCGTTTATTCGCG 40260 || | ||| | || | || |||||| || |||| ||| || | ||| | | Sbjct 87824 TTCTCTCCCAGC-GAGGGGGGGGATCTG-TTGGCCGCCAGCAACCGTCCATTTGTGCAGT 87881 Query 40261 GATTTATGACGCAAGTTGGTGCCACA-CAGGCGGCTGGCCTTGTAACTGAAGATGGGCGA 40319 ||| |||| |||| ||| | | | ||||| || || | |||| ||| || || Sbjct 87882 CATTCCTGAC-CAAGCTGGGGGCGGAGCAGGCCGCCGGATACCTCACTGCAGACGGTCGC 87940 Query 40320 CCAACACGGCAACTTGTAGACCGTATACAAAACGCGATCTTTGCCAAGGCATATAA---G 40376 || ||| ||| |||| ||||| || || ||| || || |||||||| || || | Sbjct 87941 CCGACAAAGCAGGTTGTTGACCGGATTCAGGCCGCCATATTCGCCAAGGCGTACAAATCG 88000 Query 40377 GATGCGCGCCTGGTAAGAATGGTTGCAGAAGAACCTGATCCGGATATGCGTAATGTTCTG 40436 || || ||| | | ||| | ||||| ||||| || || || || || | ||| Sbjct 88001 GAGTCG---CTGCTCCGGCTGGCAGTGGAAGAGCCTGACCCCGAGATCCGCAACATCCTG 88057 Query 40437 ACGGCGCTTAATGCGGCAGCCAATGATTTTGTCCAGATGCAGGC--TTTATCAGGAGAAG 40494 ||||| || || | ||| ||| |||||| |||||| ||| | |||| || || | Sbjct 88058 ACGGCCCTGAACGTGGCGGCCCCGAGTTTTGTTCAGATG--GGCTATCTATCCGGTGAGG 88115 Query 40495 CGCACAAGCAGGCTG-TGAC 40513 ||||||||||| ||| |||| Sbjct 88116 CGCACAAGCAGACTGCTGAC 88135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330890247108520