Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq673 114 3e-20
seq610 114 3e-20
seq966 105 2e-17
seq111 104 5e-17
seq122 96.9 8e-15
>seq673
Length=25255
Score = 114 bits (126), Expect = 3e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| || |||||||| || || ||||| || ||||||||||| || | | || |
Sbjct 24422 AGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGG 24481
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| || || || || ||||||||||| || | |||||| || | | |||||| |||
Sbjct 24482 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCC 24541
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| |||| | | |||| || ||| || || || ||
Sbjct 24542 TTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTG 24601
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || ||||| ||||| || |||||||| | |||||||||
Sbjct 24602 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTT 24642
>seq610
Length=159711
Score = 114 bits (126), Expect = 3e-20
Identities = 161/224 (72%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || ||||| ||||| || || || ||||||||||| |||| | ||| |
Sbjct 159335 GAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACG 159276
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| || ||||||||||| | |||||| || | | ||| |||
Sbjct 159275 ACCATCCTCCAGCTGCTTT--CCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCT 159218
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || ||||| || || || |||| | | || || ||| || || |||
Sbjct 159217 TCCTTATCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGA 159158
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || ||||||||||| | |||||| ||
Sbjct 159157 GTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATATT 159114
Score = 113 bits (124), Expect = 1e-19
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||| ||||| || || || ||||||||||| |||| | ||| | |||||
Sbjct 159556 AGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 159497
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| || ||||||||||| | |||||| || | | ||| |||||||| |
Sbjct 159496 TCCAGCTGCTTT--CCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTAT 159439
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| ||||| || || || |||| | | || || ||| || || ||||| || |
Sbjct 159438 CCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATGG 159379
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| || || || || ||||||||||| | |||||||
Sbjct 159378 TCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 159344
>seq966
Length=353950
Score = 105 bits (116), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || ||||| ||||| || || |||||||||||||| |||| | || | |||||
Sbjct 436 GAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGACAGCGTACGACCATC 377
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || ||||||||||| | |||||| || | | || ||||||||
Sbjct 376 CTCCAGCTGCTTT--CCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 319
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| ||||| || || || |||| | | || || ||| || || || || ||
Sbjct 318 TCCTGAATCTTAGCCTTCACGTTCTCAATTGTATCGGATGGCTCGACCTCCAGGGTGATG 259
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || || ||||||||||| | |||||||
Sbjct 258 GTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATT 223
Score = 100 bits (110), Expect = 7e-16
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || ||||| ||||| || || || || |||||||| |||| | ||| | |||||
Sbjct 208 GAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCATC 149
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || ||||||||||| | |||||| || | | ||| ||||||||
Sbjct 148 CTCCAGCTGCTTT--CCAGCGAAGATAAGACGCTGCTGATCTGGAGGGATGCCTTCCTTA 91
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| ||||| || || || |||| | | || || ||| || || ||||| ||
Sbjct 90 TCCTGAATCTTAGCCTTCACGTTCTCAATCGTATCGGATGGCTCGACCTCCAGAGTGATG 31
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAA 152095
|| || || || || |||||||||||
Sbjct 30 GTCTTTCCTGTCAGGGTCTTCACGAA 5
>seq111
Length=461598
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || |||||||| || || || || || || ||||| |||| | ||| | || |||
Sbjct 359667 AGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGACAGAGTACGTCCGTCT 359726
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||||||||| | |||||| |||| || || || ||||| ||
Sbjct 359727 TCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCC 359786
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || ||| |||| | | || || ||| || ||||| || || ||
Sbjct 359787 TGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTC 359846
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| || || ||||||| ||||||
Sbjct 359847 TTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
>seq122
Length=254344
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | || || || ||||| || |||||||| || |||| | || | || ||
Sbjct 68466 GAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGTCCGTC 68525
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || || ||||||||||| | | |||||| || | | || || ||||| ||
Sbjct 68526 TTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 68585
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| |||| | | | || ||| ||| || || ||||| || ||
Sbjct 68586 CTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGT 68645
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | ||||||||||||| ||||||
Sbjct 68646 CTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 68678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153787981009620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |