Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq122 136 3e-27
seq966 134 1e-26
seq610 132 3e-26
seq673 127 1e-24
seq111 116 3e-21
>seq122
Length=254344
Score = 136 bits (150), Expect = 3e-27
Identities = 165/222 (74%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || |||||| |||||||| || |||| || || |||| |||
Sbjct 68470 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGTCCGTCTTCC 68529
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| |||||||||||||||||||||| || | || ||||| |||
Sbjct 68530 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGG 68589
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| || | | |||| | ||||| || | | |||||||||| || ||||||||
Sbjct 68590 ATCTT-GGCCTTGACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATCGTCTT 68648
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT----GATGTGAA 44345
|| || | |||||||||||||| ||||| ||||||||
Sbjct 68649 GCCAGTCAACGTCTTCACGAAGATCTGCATACTAGATGTGAA 68690
>seq966
Length=353950
Score = 134 bits (148), Expect = 1e-26
Identities = 174/238 (73%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 44101 TTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||| | || |||||| | || | | ||| || || || || ||||||||||||||
Sbjct 460 TTAATACACTCCCCCACGAAGACGGAGCACTAGATGGAGAGTCGATTCCTTTTGGATGTT 401
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| |||| || || | || ||||||||||| || || ||||| | |||||||||
Sbjct 400 GTAGTCGGACAGCGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTG 341
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279
||||| ||| | |||||||| ||| ||||| ||||| |||| | || || ||||
Sbjct 340 ATCTGGAGGAATGCCTTCCTTATCCTGAATCTTAGCCTTCAC-GTTCTCAATTGTATCGG 282
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||||| || || |||||||| || |||||||||||||| || |||||
Sbjct 281 ATGGCTCGACCTCCAGGGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 224
Score = 122 bits (134), Expect = 6e-23
Identities = 164/226 (73%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | || | | |||||| || || || ||||| || |||||||| ||
Sbjct 226 CATTCCTCCACGAAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGAATGTTGTAGTC 167
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || ||||||||||| || || ||||| | ||||||||||||||
Sbjct 166 GGACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGG 107
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| ||||| |||| | || || |||| | |
Sbjct 106 AGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCAC-GTTCTCAATCGTATCGGATGGCT 48
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331
| ||||||| || || |||||||| || |||||||||||||| ||
Sbjct 47 CGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAAT 2
>seq610
Length=159711
Score = 132 bits (146), Expect = 3e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | || | | |||||| || || || ||||| ||||||||||| ||
Sbjct 159347 CATTCCTCCACGGAGACGGAGCACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTC 159288
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || ||||||||||| || || ||||| | ||||||||||||||
Sbjct 159287 GGACAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGG 159228
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| ||||| |||| | || || |||| | |
Sbjct 159227 AGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCAC-GTTCTCAATCGTATCGGATGGCT 159169
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || |||||||| || |||||||||||||| || |||||
Sbjct 159168 CGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 159117
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
|||||| | || | || ||||| || || || ||||| ||||||||||| ||||
Sbjct 159572 TCCCCCACGAAGACGCAGTACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGA 159513
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| || | || ||||||||||| || || ||||| | |||||||||||||| |||
Sbjct 159512 CAGAGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 159453
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288
| |||||||| ||| ||||| ||||| |||| | || || |||| | || |
Sbjct 159452 GATGCCTTCCTTATCCTGAATCTTAGCCTTCAC-GTTCTCAATCGTATCGGATGGCTCGA 159394
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| || || |||||||| || |||||||||||||| || |||||
Sbjct 159393 CCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 159345
>seq673
Length=25255
Score = 127 bits (140), Expect = 1e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||| || ||| || || || || |||||| ||||||||||| || | || ||
Sbjct 24422 AGTCGCAGCACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGG 24481
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
|||| ||||||||||| ||||| ||||||| |||||||||||||| || | || |||
Sbjct 24482 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCC 24541
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| |||||| ||||| | | |||||||| | | || ||||| | ||
Sbjct 24542 TTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTG 24601
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || ||||| || |||||||| || |||||
Sbjct 24602 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 24639
>seq111
Length=461598
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || |||||| |||||||| ||||| || || ||||| ||||
Sbjct 359652 CCACCACGCAGGCGCAGCACCAGATGAAGCGTCGATTCCTTCTGAATATTGTAGTCGGAC 359711
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| ||||||||||| || || ||||| | |||||||||||| | ||
Sbjct 359712 AGAGTACGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGCGGA 359771
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| ||||| ||||| | | || || || | || || |||
Sbjct 359772 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 359831
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || ||||| ||||||||||| || |||||||| |||||
Sbjct 359832 TCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 359878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359980660009740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |