Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20]
2,220 sequences; 136,935,538 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq673 163 7e-35
seq966 159 8e-34
seq610 159 8e-34
seq122 141 2e-28
seq111 141 2e-28
>seq673
Length=25255
Score = 163 bits (180), Expect = 7e-35
Identities = 171/224 (76%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||||||||| ||||| || || || ||||| |||||||| ||
Sbjct 24642 AAAATGC---AGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAG 24586
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| |||||||||||||| || || ||||| |||||||| || |||||||| ||
Sbjct 24585 CCATCGGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCA 24526
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| || || ||||||||||| || ||||| || || || | || ||| | ||
Sbjct 24525 GATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTTTCGGAC 24466
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| ||| |||| || || || || ||||||||||| || ||||
Sbjct 24465 TACAACATCCAGAAGGAGTCGACCCTGCATCTTGTGCTGCGACT 24422
>seq966
Length=353950
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || |||||||| || |||||||| ||||| || || ||
Sbjct 227 CAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACCCTGGAGGTCGAGCCATCCGAT 286
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| || ||||||||||| || ||||| || ||||| || |||||
Sbjct 287 ACAATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATTCCTCCAGATCAGCAG 346
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| ||||| ||||| || ||||| | || || |||| || ||| ||
Sbjct 347 CGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACGCTGTCCGACTACAACATC 406
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| || || ||||| ||
Sbjct 407 CAAAAGGAATCGACTCTCCATCTAGT 432
Score = 154 bits (170), Expect = 4e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986
||||||||||| || || |||||||| || ||||| || ||||| || || || ||
Sbjct 2 ATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGATACG 61
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
|| |||||||| || ||||||||||| || ||||| |||||||| || ||||| ||
Sbjct 62 ATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGT 121
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
||||||||||| ||||| ||||| || ||||| | ||||| |||| || ||| | ||
Sbjct 122 CTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATTCAG 181
Query 178107 AAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || ||||| ||
Sbjct 182 AAGGAATCGACTCTCCATCTGGT 204
>seq610
Length=159711
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || |||||||| || ||||| || ||||| || || ||
Sbjct 159120 CAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGAT 159179
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| || ||||||||||| || ||||| |||||||| || |||||
Sbjct 159180 ACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAG 159239
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| ||||| ||||| || ||||| | ||||| |||| || ||| ||
Sbjct 159240 CGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATC 159299
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||||| ||
Sbjct 159300 CAGAAGGAATCGACTCTCCATCTGGT 159325
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || |||||||| || ||||| || ||||| || || ||
Sbjct 159348 CAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCATCCGAT 159407
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| || ||||||||||| || ||||| |||||||| || |||||
Sbjct 159408 ACGATTGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAG 159467
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| ||||| ||||| || ||||| | ||||| |||| || ||| ||
Sbjct 159468 CGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGTACTCTGTCCGACTACAACATC 159527
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||||| ||
Sbjct 159528 CAGAAGGAATCGACTCTCCATCTGGT 159553
>seq122
Length=254344
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || | || || || |||||||| || |||||||| || ||
Sbjct 68675 CAGATCTTCGTGAAGACGTTGACTGGCAAGACGATCACTCTGGAGGTGGAGCCTTCGGAT 68616
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||||||||| ||||| |||||||| || || || || || || |||||
Sbjct 68615 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 68556
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||| ||||| ||| | || || |||| |||||| ||
Sbjct 68555 CGTTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTATAACATC 68496
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 68495 CAGAAGGAGTCGACCCTGCA-CTTG 68472
>seq111
Length=461598
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| ||||| || || || |||||||| ||||| || ||| ||
Sbjct 359875 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCGGAT 359816
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| || || ||||| |||||||| || || || || ||||| |||||
Sbjct 359815 ACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCAGCAG 359756
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || ||||| ||||| ||| | ||||| |||| || || |
Sbjct 359755 CGTCTTATCTTCGCTGGCAAGCAGCTGGAAGACGGACGTACTCTGTCCGACTACAATATT 359696
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||||| ||
Sbjct 359695 CAGAAGGAATCGACGCTTCATCTGGT 359670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203696961370680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |