Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28]
1,266 sequences; 216,307,690 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq302 178 1e-39
seq113 91.5 2e-13
>seq302
Length=5740867
Score = 178 bits (196), Expect = 1e-39
Identities = 305/440 (69%), Gaps = 2/440 (0%)
Strand=Plus/Plus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||||||| || || ||||| || || | ||||||||| | ||| | ||||| ||
Sbjct 73029 AACATCAGGCAGGCAAAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAG 73088
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| |||| || |||||| || || ||||| | ||| || || || ||||| |||
Sbjct 73089 AACGTCAGACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCA 73148
Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134
||||| || |||||||||| || ||||| | | ||| ||| | | | || |
Sbjct 73149 CTGAAGAAGATGCCCTCGACGGCAGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGC 73208
Query 17135 TTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTC 17193
||| | ||| ||||| ||| || |||| ||||| || | ||| | ||| | ||||||
Sbjct 73209 TTGCT-CGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTC 73267
Query 17194 TATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAG 17253
|| || || || | | ||| |||| ||||| || ||||| ||||| || ||
Sbjct 73268 GATCGCGTTGAACAGGTACTCCCGCTCCTTCGGGTCGCGAATGTACGTGTCGATCAGCAG 73327
Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313
|||||| ||| ||| | ||||||||| || |||||||| ||||| ||||| || ||
Sbjct 73328 CGAGTACATCTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAGC 73387
Query 17314 TTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373
|||| | || || ||| | ||| || ||| | ||||| ||||||||||| |||||
Sbjct 73388 CTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCGTC 73447
Query 17374 GCTCGCGGCGAAAAACGCCA 17393
||||| || || ||||
Sbjct 73448 CGAGGCGGCAAAGAAGGCCA 73467
>seq113
Length=5901441
Score = 91.5 bits (100), Expect = 2e-13
Identities = 185/264 (70%), Gaps = 8/264 (3%)
Strand=Plus/Minus
Query 119777 TCGAATTTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTG-TCGTG 119835
||| | ||||| || || || || ||||| | | || |||||||| || ||| |||||
Sbjct 1291899 TCGTAGTTCATGTAGCGAATTTTGCCGAATATGTCGCGCTCCTTCCA-GCCCTGGTCGTG 1291841
Query 119836 GAGCCCCGCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTA-ACT 119894
|| ||||| | | ||| | ||| || ||||| ||||| || || || || | |||
Sbjct 1291840 GATGCCCGCGATCGACCACATGCAACCGACGTACCCGTTCGGGTCGCGCCCGTCCAGACT 1291781
Query 119895 CGTATTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCAGGAGTCTCGC-TCCA 119952
||| |||||| | |||||| | | | | | ||| || || || |||| ||||
Sbjct 1291780 -GTAGCGATCGTTCAGGTAGATGGCCGTCTCG-AGCGCCTCCTCGGGCGT-TCGCGTCCA 1291724
Query 119953 TTCCAGTAtttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAAC 120012
|||||||| || || ||||||||||| || | | | || ||||| || | || || ||
Sbjct 1291723 CTCCAGTATCTTCTTCGCCCAGTACATGCGCAGGAAGCCGTGCATCTTGGCCTCCCGCAC 1291664
Query 120013 CATTTGAAGTTGTGCGGCGTTCCA 120036
||| || || || || ||||||||
Sbjct 1291663 CATCTGCAGCTGGGCCGCGTTCCA 1291640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517537409840880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |