Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq391 179 3e-40 seq934 134 1e-26 seq712 127 2e-24 seq490 116 3e-21 >seq391 Length=2819257 Score = 179 bits (198), Expect = 3e-40 Identities = 717/1112 (64%), Gaps = 40/1112 (4%) Strand=Plus/Minus Query 132878 GTCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCAAATAATACATGCCCGT 132937 |||||| || |||| | || | ||||||| || ||||||||||| |||||||| || Sbjct 157520 GTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTGGTGCGCAAATAGTACATGCCAGT 157461 Query 132938 TTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACCACCGAGTAAGTGGGTTC 132997 ||||| ||| |||||||| ||||| || || || | ||| | ||||| Sbjct 157460 CTTCAGGCCCATCTTCCACGCGTGGAAGTGCATTGACGTCAGCTTGCCGTAGTTCGGTTC 157401 Query 132998 GGCGACAAATAAATTCAGCGATTGACTCTGATCTATGAAAGGAGCACGGTCGGCGGCCAT 133057 || || | || | ||| || |||||| ||||| | | | |||||||| ||||| Sbjct 157400 CGCCACGTGGATGTTGAACGACTGCGACTGATCGATGAACGCACCCCGGTCGGCTGCCAT 157341 Query 133058 GTTTATTATACACTTTGATTTGA-TCTCCCATGCCGTCTTGAAGAGATTCTTGACATGCT 133116 | || || ||| | | ||||||| |||| ||| | |||| || | || Sbjct 157340 CTGGATGC-ACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTTCCT 157282 Query 133117 GTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCCAAAATCTTGTTGCGCAATT 133176 ||||||| || |||||||| | || ||||| | ||||| || |||| || | Sbjct 157281 TCGGTATTTGTTCGATGTTCTGGATCGAACCGTTGTGGGCCAGGATTGTGTTCTTCATAT 157222 Query 133177 CCGGAGTGT---AAATGTCGAGATCGATTAGCGCTTTGACGAGATACTGGTTGACCACTT 133233 | | || | | || | | | || | |||| || | ||||| ||||| | Sbjct 157221 C---ATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCACCACCT 157165 Query 133234 GAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACGGTTCGAAAGATT 133293 |||||||||| | |||||||| | | || || || |||||| |||| ||||| || | Sbjct 157164 GAAACTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGACGTGTACGGCTCGAACGACT 157105 Query 133294 CGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCACCAACAAAGAGT 133353 |||||||||| | || || ||||||| ||||| ||||| ||| | || || |||| Sbjct 157104 CGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGT 157045 Query 133354 TTCTTACGCCGTACTTGTTTATGTTGCACTGCA-ATTCGTTCCAGTCCCACAGAT-TGTT 133411 | | || |||| ||| || || || || ||| ||| | |||||| | || Sbjct 157044 TGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCG-CCCAATTCCACAGGTCCGTC 156986 Query 133412 GGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAAATACCCCTGCTCAC 133471 || || |||| ||||| | |||| ||||||| ||||||| Sbjct 156985 GG-------TACCTTGTTCCACATGTCGT---------ACTGCAGAATACCCTTGCTCAC 156942 Query 133472 CGGACTGTCCGT-GTACGATTCATAGGGTCCGT--TGATTTTGGCCAGCTCGCAGCTAGC 133528 |||| ||| | ||||| || || ||||| | ||| ||||| |||||||||||| Sbjct 156941 CGGA-GATCCTTCGTACGTCTCGTACGGTCCCTCCTGA--GCGGCCATCTCGCAGCTAGC 156885 Query 133529 CTCCAAAGCGGCAAAGTAAATGGTTTCCGCGATTGAATAGTTGACGAACCTG-GCATCGT 133587 |||| || || |||| ||||| || || | |||| | || || || Sbjct 156884 TTCCAGCGCACCATAGTAGATGGTCTCAAATATCTGCTGATTGA-GCTTTTGCGCCTCCG 156826 Query 133588 CGCTATCGTAGGCGATGTCGAGAAGAACAAACGCGTCGGCCAAACCCTGTATGCCGACGC 133647 | || ||||| | || | | | | | ||||| || |||| |||||| | ||||| | Sbjct 156825 CACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATAC 156766 Query 133648 CGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGGATAGTGGTTGACGT 133707 |||| || || || | || | || || || | | || ||| ||| |||| Sbjct 156765 CGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGT 156706 Query 133708 CGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGTTTCAGCAAAACATAGT 133767 |||| |||||||| | ||||| | ||||| | | | ||||||| | | | Sbjct 156705 CGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAAT 156646 Query 133768 CAAATGTCTTGGCGTCGACGTCGACGCACTTGTTGACGGCAATACTGGCTAGATTACAAA 133827 || | | | |||| | |||| || |||| | ||||| ||| || || || | Sbjct 156645 CATA---CGTACGGTCGGGCTGGACGAACATGTTCAGCGCAATCGAGGCCAGGTTGCACA 156589 Query 133828 CGGCCGTCTCGTTC-TCGTCGCAATACTGGACGATCTCGGCGCAGAGGTTGCTGCATTTG 133886 | ||| |||| | ||| || | |||| || ||||||| ||| ||||| ||| ||| Sbjct 156588 CCGCCACTTCGTCCTTCGACG-AGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTG 156530 Query 133887 ATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCTTGTATAGCATGTAC 133946 |||||||| | |||| ||| ||||| | |||||| |||||||| ||||||||| Sbjct 156529 ATGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTAC 156470 Query 133947 GGCCCGCCGGTTTCGACGTTGGTCTCGACGAT 133978 || |||| || || || | || |||| ||| Sbjct 156469 GGTACGCCCGTCTCCACCTGGGATTCGATGAT 156438 >seq934 Length=8401807 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | || | ||||||||| | || || || || || |||||||| || Sbjct 268421 TACCACCACGGAGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCG 268480 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || |||||| |||||| ||||| || || || |||| |||||||||||||| || | Sbjct 268481 ACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGG 268540 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| || || || || | ||||| ||||||| | ||||| Sbjct 268541 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGA 268600 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || |||||||| || ||||| || ||||||||||| Sbjct 268601 CCTCAAGCGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649 >seq712 Length=12093160 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | || ||||| || | || ||||| || || |||||||| ||| Sbjct 3459566 ACCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 3459625 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||||| |||||| ||||| || || ||| ||||||||||||||||||| || || Sbjct 3459626 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGG 3459685 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || ||||||||||| || || || || | |||| || |||| | |||||| Sbjct 3459686 GATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 3459745 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| | ||| | ||| || || || || ||||| || || |||||||| Sbjct 3459746 CTCAAGGGTAATCGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3459793 >seq490 Length=13136524 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||| || ||| || ||||| Sbjct 5732921 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732862 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| |||| |||||||||||||| || || || ||||||||||| Sbjct 5732861 AGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732802 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||||| ||||||||| | || | || ||| Sbjct 5732801 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732742 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 5732741 CCAGTCAGCGTCTTCACGAAGATCTGCAT 5732713 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||| || ||| || ||||| Sbjct 5732693 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732634 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| |||||||||||||| || || || ||||||||||| Sbjct 5732633 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732574 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||||| ||||||||| | || | || ||| Sbjct 5732573 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732514 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || |||||||| Sbjct 5732513 CCAGTCAGCGTCTTCACGAAGATCTGCAT 5732485 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||| || ||| || ||||| Sbjct 5731119 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5731060 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| |||||||||||||| || || || ||||||||||| Sbjct 5731059 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5731000 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||||| ||||||||| | || | || ||| Sbjct 5730999 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5730940 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || || || || |||||||| Sbjct 5730939 CCAGTCAACGTCTTCACGAAGATCTGCAT 5730911 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||| || ||| || ||||| Sbjct 5732465 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732406 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| |||||||||||||| || || || ||||||||||| Sbjct 5732405 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732346 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||||| ||||||||| | || | || ||| Sbjct 5732345 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732286 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTG 118735 || ||||| || || || || ||||| Sbjct 5732285 CCAGTCAGCGTCTTCACGAAGATCTG 5732260 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| |||| || ||||| || || || ||||| || || || || ||| || Sbjct 10198982 CACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCTTC 10199041 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| ||||| ||| |||| |||||||||||||| ||||| ||||| ||||| || Sbjct 10199042 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCCTG 10199101 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||||| ||| || || | || | || || Sbjct 10199102 AATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGCTCCACTTCCAGCGTGATGGTCTT 10199161 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||||||| || || || || || |||||| Sbjct 10199162 TCCGGTCAGGGTCTTGACGAAGATTTGCATG 10199192 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| || || || || | | || |||||||||||| ||| | || ||| Sbjct 10201440 CAGCACCAGATGCATCGTCGATCCGTGCTGGATGTTGTAATCGGAGATAATTCGGCCATC 10201499 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || ||||| || || ||| |||||| ||||| || || || | || ||||| || Sbjct 10201500 GTCCAGCTGCTTGCCGGCGAAGATGATGCGCTGTTGGTCTGGTGCAATACCCTCGCGTTC 10201559 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||||| ||| | | | || || |||| | |||| |||| || | ||| Sbjct 10201560 CTCGATTTTACTTTTGATATCTAGAACCGTTTCCGAGGCGGCGACGTCGAGCGTGATCGT 10201619 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 ||| ||||| || ||||||||||||||||||||||| Sbjct 10201620 TTTTCCGGTTAGCGTTTTTACAAAAATCTGCATGGC 10201655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433823706268072