Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq113 84.2 4e-11 >seq113 Length=5901441 Score = 84.2 bits (92), Expect = 4e-11 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 189431 GCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAA 189490 || ||||| || || || ||||||||| | || ||||||||||| | || | || Sbjct 1291619 GCCGAAACGCACGACGACCTGTGGAACGCGGCCCAGCTGCAGATGGTGCGGGAGGCCAAG 1291678 Query 189491 ATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCT 189550 ||||| | || | || ||||| ||||| ||||||||||| || ||||| |||| || Sbjct 1291679 ATGCACGGCTTCCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGACGCGAACGCCC 1291738 Query 189551 GAAGACGC-TTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAACTAGACGGCACGG 189608 || || || | ||| | | ||||| ||||| | ||| || ||||| | Sbjct 1291739 GAGGAGGCGCTCGAG--ACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGCG 1291796 Query 189609 ATCCTAACGGATACGTAGGTTGTATGTGGTCTAT 189642 | || ||||| ||||| ||||| |||||||| || Sbjct 1291797 ACCCGAACGGGTACGTCGGTTGCATGTGGTCGAT 1291830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923182190410640